Gene detail information of Glyur000726s00027881.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14680.1 | 3.00E-52 | cytochrome P450, family 72, subfamily A, polypeptide 14 |
| NR | BAL45208.1 | 8.16E-90 | cytochrome P450 monooxygenase [Glycyrrhiza uralensis] |
| COG | YP_003385314.1 | 2.00E-27 | cytochrome P450 [Spirosoma linguale DSM 74] |
| Swissprot | tr|H1A988|C7254_GLYUR | 2.00E-63 | 11-oxo-beta-amyrin 30-oxidase |
| trEMBL | tr|H1A989|H1A989_GLYUR | 3.00E-90 | Cytochrome P450 monooxygenase {ECO:0000313|EMBL:BAL45208.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00726 | 3679 | 4113 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP72A14 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000726s00027881.1 | PF00067.17 | p450 | 4 | 136 | 2.40E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 158.564 |
| SRR1783600 | control | 161.591 |
| SRR1783602 | moderate drought stress | 78.232 |
| SRR1811619 | moderate drought stress | 77.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 280.222 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 260.308 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.978 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.999 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.624 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.059 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.303 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.874 |
| SRR2868004 | Drought Stress (root) | 2.547 |
| SRR2967015 | Control (root) | 1.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.081 |
| SRR9715740 | Leaf | 4.136 |
| SRR9715741 | Leaf | 2.715 |
| SRR9715739 | Root | 60.048 |
| SRR9715742 | Root | 256.571 |
| SRR9715743 | Root | 220.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 301.952 |
| SRR8400027 | Control - Root | 239.738 |