Gene detail information of Glyur000723s00020872 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42975.1 | 4.00E-48 | |
| NR | XP_004491320.1 | 4.53E-98 | PREDICTED: uncharacterized protein LOC101504758 [Cicer arietinum] |
| trEMBL | tr|V7BAB4|V7BAB4_PHAVU | 9.00E-94 | Uncharacterized protein {ECO:0000313|EMBL:ESW13411.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00723 | 48139 | 50184 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.606 |
| SRR1783600 | control | 1.745 |
| SRR1783602 | moderate drought stress | 3.169 |
| SRR1811619 | moderate drought stress | 2.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.553 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.925 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.825 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.407 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.182 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.910 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.755 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.770 |
| SRR2868004 | Drought Stress (root) | 4.227 |
| SRR2967015 | Control (root) | 3.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 60.502 |
| SRR9715740 | Leaf | 110.422 |
| SRR9715741 | Leaf | 67.791 |
| SRR9715739 | Root | 0.985 |
| SRR9715742 | Root | 3.051 |
| SRR9715743 | Root | 3.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.682 |
| SRR8749028 | MeJA induced 9h | 1.166 |
| SRR8749029 | MeJA induced 9h | 1.088 |
| SRR8749030 | Uninduced | 2.251 |
| SRR8749031 | Uninduced | 1.412 |
| SRR8749032 | Uninduced | 2.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.541 |
| SRR8400027 | Control - Root | 5.060 |