Gene detail information of Glyur000723s00020871 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50890.1 | 5.00E-141 | alpha/beta-Hydrolases superfamily protein |
| NR | AET00369.2 | 0 | GDSL esterase/lipase plant-like protein [Medicago truncatula] |
| Swissprot | tr|Q680C0|GDL62_ARATH | 1.00E-33 | GDSL esterase/lipase At4g10955 |
| trEMBL | tr|G7KD41|G7KD41_MEDTR | 0 | GDSL esterase/lipase plant-like protein {ECO:0000313|EMBL:AET00369.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00723 | 39550 | 47041 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.439 |
| SRR1783600 | control | 3.458 |
| SRR1783602 | moderate drought stress | 2.289 |
| SRR1811619 | moderate drought stress | 2.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.861 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.883 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.307 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.227 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.041 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.293 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.697 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.449 |
| SRR2868004 | Drought Stress (root) | 2.729 |
| SRR2967015 | Control (root) | 2.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.715 |
| SRR9715740 | Leaf | 2.226 |
| SRR9715741 | Leaf | 1.686 |
| SRR9715739 | Root | 0.783 |
| SRR9715742 | Root | 1.899 |
| SRR9715743 | Root | 1.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.000 |
| SRR8749028 | MeJA induced 9h | 0.883 |
| SRR8749029 | MeJA induced 9h | 0.848 |
| SRR8749030 | Uninduced | 0.362 |
| SRR8749031 | Uninduced | 0.376 |
| SRR8749032 | Uninduced | 0.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.513 |
| SRR8400027 | Control - Root | 4.823 |