Gene detail information of Glyur000723s00020870 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN18073.1 | 1.01E-50 | hypothetical protein glysoja_020846 [Glycine soja] |
| trEMBL | tr|K7MR80|K7MR80_SOYBN | 3.00E-51 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G13001.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00723 | 37812 | 38324 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000723s00020870.1 | PF05678.9 | VQ | 29 | 53 | 8.20E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.071 |
| SRR1783600 | control | 0.072 |
| SRR1783602 | moderate drought stress | 0.110 |
| SRR1811619 | moderate drought stress | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.018 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.806 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.496 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.441 |
| SRR2868004 | Drought Stress (root) | 0.039 |
| SRR2967015 | Control (root) | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.116 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.053 |
| SRR8749030 | Uninduced | 0.124 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.275 |
| SRR8400027 | Control - Root | 0.083 |