Gene detail information of Glyur000722s00018852 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14290.1 | 0 | alpha/beta-Hydrolases superfamily protein |
| NR | KHN03427.1 | 0 | Hypothetical protein glysoja_004453 [Glycine soja] |
| COG | YP_004861705.1 | 2.00E-19 | alpha/beta hydrolase fold protein [Candidatus Chloracidobacterium thermophilum B] |
| trEMBL | tr|K7MAP2|K7MAP2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G10900.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00722 | 94839 | 100614 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000722s00018852.1 | PF12695.2 | Abhydrolase_5 | 68 | 260 | 5.10E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.319 |
| SRR1783600 | control | 7.226 |
| SRR1783602 | moderate drought stress | 9.677 |
| SRR1811619 | moderate drought stress | 9.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.138 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.328 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.174 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.006 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.160 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.101 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.515 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.218 |
| SRR2868004 | Drought Stress (root) | 25.225 |
| SRR2967015 | Control (root) | 20.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.217 |
| SRR9715740 | Leaf | 11.691 |
| SRR9715741 | Leaf | 14.456 |
| SRR9715739 | Root | 1.408 |
| SRR9715742 | Root | 7.879 |
| SRR9715743 | Root | 6.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.189 |
| SRR8749028 | MeJA induced 9h | 23.796 |
| SRR8749029 | MeJA induced 9h | 28.994 |
| SRR8749030 | Uninduced | 44.125 |
| SRR8749031 | Uninduced | 27.622 |
| SRR8749032 | Uninduced | 44.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.870 |
| SRR8400027 | Control - Root | 18.923 |