Gene detail

Gene detail information of Glyur000722s00018847.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G19010.1	0	mitogen-activated protein kinase 16
NR	XP_007147789.1	0	hypothetical protein PHAVU_006G155300g [Phaseolus vulgaris]
COG	YP_003112167.1	2.00E-27	serine/threonine protein kinase [Catenulispora acidiphila DSM 44928]
Swissprot	tr\|Q8W4J2\|MPK16_ARATH	0	Mitogen-activated protein kinase 16
trEMBL	tr\|V7BRY6\|V7BRY6_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW19783.1}

Sequence

Transcript Sequence

>Glyur000722s00018847.1
TTTCCCCCCCATATTCGTCCCTTTTATTTCTCTGTCTCTCTCTAAGCTCAGCACCACAACCTTCTTCAACTTCAACTTGGAACTTGAAGTGCGTGCGTGTTCTCACTGAGATCCAAAAGTTTATGTTCTTTTTTTCACTACCAATTTTTCAATTACAATCGGCTTCTTCAATTTGAAGAATCTTATCTCAAGCAGTTCCATATTTTTTTTACATGCTTCTATTTATTCACTTCCTTCAGCATCATTATTAGTGATTATCGCCACAGCAGATCCTCCAAGATTAGTTTTTTCCGCTGATTCNTAGCTCTGCGCCTTGTAACAATTCACACCCCAACGTGATCTGTAACCTTGGCCTTTTCAGCTACATTTCGAGACTTCCGCCGTTGTTTTTTTTTTTTTTTGGGTTTTCACTTTGCCACTTTTTCGATTCTATTATAGTGAGTATTCTAGTACATGTTCCTGTTTTCTCAATCGAAGCTGCTATATTGGTTGCCAAACATTACTGGGTCTGTTTCCTTGTTGAGGTCTGTTCTAGCTTGAATTGAAAGCTCTGTCTTTTAGTTTCTACTCTCCTTTTTGATTTTATTTTCTCTTTGCATTTTGACTACCCCTCGTGATCTGAGGCGTTCTAGTGCAAGTGGGGTTATCTCTTTTTTTTCTTCCTGGGACTTTGAACTGGAAGTGGGAATTTGGGTGATCTGGATTTGAGTTGAGAGGAGGGGTTTGTTGGATGCACCTATTGGCTTAAACCATTTGAAGGGTTTTGTATGCTTTAGTTGCAAAGATGCTTCCTGATCAGAGGAAAAAGTCATCTGTGGATGTAGATTTCTTTACTGAATATGGTGAAGGGAGCAGATATAGAATAGAGGAAGTAATAGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCTATAAAGAAGATCAATGACATATTTGAACATGTATCTGATGCCACTCGCATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGTCATCCGGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCAAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATCTGACACNAGAGCATTACCAGTTTTTCCTTTATCAGCTTCTACGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATTTAAAGCCAAAAAACATTTTAGCAAATGCGGACTGCAAACTGAAGATTTGTGACTTCGGTCTTGCCAGAGTGGCTTTTAATGATACACCCACTGCTATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTCTCAAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTCCATCAACTGGACCTCATGACTGATTTTCTTGGAACACCATCTTCTGAAGCCATTGCAAGGGTAAGAAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAAGAAGAAGCCAGTTCCTTTCTCGCAGAAATTTCCTAATGCAGACCCCCTTGCTCTTAGGTTGTTAGAAAGAATGCTGGCTTTTGAGCCTAAGGATCGGCCTACTGCTGAAGAGGCCCTAGCAGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTGCTCAGCCGGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACAAAGGAAGATGTGCGAGAGCTTATATACCGAGAAATTTTGGAGTACCATCCGAAGATGTTAAAGGAATTTCTAGAGGGGGCAGAGCCAACGGGTTTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCATATCTCGAGGAGCATTATGGAAAAGGAGGAACCGTTGCTCCACCTGAGAGGCAACATGCGTCATTGCCCAGACCATGTGTGTTGTATTCTGATAACTCAATACAGAATACGGCCGAGGTTGCAGATAATCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACCACCTGTAGATAGGAGCAGTGCTATCCCTATGACTCGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGTGTTGCTGCAAGGCCCGGAAAAGTTGTCGGTTCTGTAATGCGTTACAACAACTGTGGGGTGGCAGTGACGGCAGAGGCCGAACAACAACGGAGGGTGGTTAGGAATCCATCTGTTTCGGCTCAGTATGCTGCATCGAGCTATCCGAGGAGAAATCCAAGCTATAAAAGTGAGAGGGGGGCAGAAGATGATGGGATGGAAGGTTCTAATGGACTGCAGCCAAAGCCTCAATACATGGCAAGGAAAGTTGCTGCTGCTCCAGGCGGAGCCGGTGGTCAGTGGTATTGATTCTGGATATAGTTATGTTGAATGCATATATGTGGCCTACAACTGCCTTGTGCCATGAAGCTATGGTACCTGGATTTCATGTCCTACACCTACCTAATCTTGATCATCTGAACTGCTAAAATTTGAAGTGGCATACATAACCTTGACAATTCTCAACCAATGGCCTGAGAGACTCACGTCTAAAGAAAAAAGCTTCTAGCAGACGATTTCTTAAATCTTGCAATTTGCATCATCAATTGGAAGTTNGGAAGGGTTCACACGGTCCAATTGATGATGATTTTCGTACACTAATTTGTTAATAACAGAGAACATGAAAGACCTGATAACTCATCGAACTTGAAGGTAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00722	75338	80601	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004707 MAP kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000722s00018847.1	PF00069.20	Pkinase	25	316	4.80E-68

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	18.842
SRR1783600	control	18.926
SRR1783602	moderate drought stress	9.327
SRR1811619	moderate drought stress	9.300

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.616
DRR006520	Root Summer glycyrrhizin high producing strain	20.582
DRR006521	Root Winter glycyrrhizin high producing strain	1.332
DRR006522	Root Winter glycyrrhizin high producing strain	1.271
DRR006523	Root Summer glycyrrhizin low producing strain	26.406
DRR006524	Root Summer glycyrrhizin low producing strain	26.169
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.211
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.101

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	29.405
SRR2868004	Drought Stress (root)	32.380
SRR2967015	Control (root)	38.005

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	49.061
SRR9715740	Leaf	56.255
SRR9715741	Leaf	55.356
SRR9715739	Root	5.545
SRR9715742	Root	19.167
SRR9715743	Root	16.042

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.390
SRR8749028	MeJA induced 9h	20.970
SRR8749029	MeJA induced 9h	11.399
SRR8749030	Uninduced	14.417
SRR8749031	Uninduced	8.429
SRR8749032	Uninduced	6.614

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	32.148
SRR8400027	Control - Root	34.241