Gene detail information of Glyur000722s00018844 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23590.1 | 0 | REF4-related 1 |
| NR | XP_003547235.2 | 0 | PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like [Glycine max] |
| Swissprot | tr|Q9LUG9|MD33A_ARATH | 0 | Mediator of RNA polymerase II transcription subunit 33A |
| trEMBL | tr|I1MFD7|I1MFD7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G10970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00722 | 52526 | 60904 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.972 |
| SRR1783600 | control | 6.917 |
| SRR1783602 | moderate drought stress | 8.528 |
| SRR1811619 | moderate drought stress | 8.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.425 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.579 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.340 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.366 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.155 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.230 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.842 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.817 |
| SRR2868004 | Drought Stress (root) | 47.075 |
| SRR2967015 | Control (root) | 50.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.510 |
| SRR9715740 | Leaf | 21.695 |
| SRR9715741 | Leaf | 20.539 |
| SRR9715739 | Root | 5.653 |
| SRR9715742 | Root | 18.457 |
| SRR9715743 | Root | 15.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.765 |
| SRR8749028 | MeJA induced 9h | 5.039 |
| SRR8749029 | MeJA induced 9h | 1.678 |
| SRR8749030 | Uninduced | 2.349 |
| SRR8749031 | Uninduced | 1.663 |
| SRR8749032 | Uninduced | 1.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.967 |
| SRR8400027 | Control - Root | 22.473 |