Gene detail information of Glyur000722s00018833 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G55230.1 | 5.00E-80 | Family of unknown function (DUF716) |
| NR | XP_004486117.1 | 4.69E-123 | PREDICTED: transmembrane protein 45B-like [Cicer arietinum] |
| trEMBL | tr|V7C9Y7|V7C9Y7_PHAVU | 8.00E-123 | Uncharacterized protein {ECO:0000313|EMBL:ESW26148.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00722 | 34625 | 37721 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000722s00018833.1 | PF04819.7 | DUF716 | 65 | 202 | 3.80E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.063 |
| SRR1783600 | control | 9.970 |
| SRR1783602 | moderate drought stress | 9.918 |
| SRR1811619 | moderate drought stress | 10.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.292 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.054 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.040 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.148 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.800 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.554 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.237 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.521 |
| SRR2868004 | Drought Stress (root) | 46.322 |
| SRR2967015 | Control (root) | 15.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.035 |
| SRR9715740 | Leaf | 5.190 |
| SRR9715741 | Leaf | 7.286 |
| SRR9715739 | Root | 30.454 |
| SRR9715742 | Root | 3.982 |
| SRR9715743 | Root | 8.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.376 |
| SRR8749028 | MeJA induced 9h | 183.056 |
| SRR8749029 | MeJA induced 9h | 87.106 |
| SRR8749030 | Uninduced | 51.299 |
| SRR8749031 | Uninduced | 226.506 |
| SRR8749032 | Uninduced | 175.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.601 |
| SRR8400027 | Control - Root | 8.146 |