Gene detail

Gene detail information of Glyur000721s00027420

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G28500.1	2.00E-91	NAC domain containing protein 73
NR	KEH30972.1	2.03E-177	NAC transcription factor-like protein [Medicago truncatula]
Swissprot	tr\|Q6NQK2\|NAC8_ARATH	1.00E-65	NAC domain-containing protein 8
trEMBL	tr\|A0A072UMS3\|A0A072UMS3_MEDTR	8.00E-178	NAC transcription factor-like protein {ECO:0000313\|EMBL:KEH30972.1}

Sequence

Transcript Sequence

>Glyur000721s00027420.1
ACCTATACTAAGCTTTACCTTTTTCTTTTCTTTTCTTTTTTCAATATTTGTTATTCCTTCTTTCTAATTTTTTTTCCCTGTTATTTGGTCATTTTATCATTATTATTAGTGAGCTGATCGATGATATTGTAGGGAGCTAGGTCAAGGTGTGTGGAAAAGGCTCTGTTTTTTGNGATATATGGGCATAGAAGCAAAAACCCAAAGAGATCATGACATGGTGCAATGACTCAGATGAGGATAGGGAGGGCATTGAACTCATCCCTCCCACTTTTATTCCTAGAACTACCAGTAGTAACACTACTACTGTTGTTACTGATGACACAACAACAAAACCAACCCAAACTCGAACCATAACTTGCCCCTCTTGTGGCCATAACATTGAATTCCAAGATCAGGGAGGAATCAATGAGTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGATCCGAATGACCAGGAGATTCTACAACATTTGGAGGCAAAGATGCTGTCTGATGTGCCCAAGCTTCATCCCCTTATTGATGAGTTCATACCAACGCTTGAAGGAGAGAACGGGATCTGTTATACTCACCCAGAAAAGCTACCAGGTGTAAGCAAAGATGGACAGATCAGGCACTTCTTTCACAGGCCTTCTAAAGCATACACAACGGGAACAAGGAAGAGAAGAAAGGTTCACACTGATGAAGAAGGGAGTGAGACAAGGTGGCANAAGACAGGGAAAACCAGACCAGTTTTTGTTGGTGGTGCTGTCAAAGGTTTCAAGAAGATACTGGTCCTCTACACCAACTATGGGAGGCAGAAGAAACCCGAGAAGACTAATTGGGTAATGCATCAATACCACCTTGGCAGTAATGAAGAAGANAAAGATGGAGAATTGGTGGTTTCAAAGGTCTTTTACCAAACACAACCTCGACAGTGTGGTGGTGGTAGTGGTAATAATAATAGTAATAATAATGACTCCAATATTATTGCAAAGGAATATGATCCTTATGAAGAAAGAGTAATGACGACTCATGACCGAGATGACAACATGATACTACCTAAGAATGCAGGTCCTCCTATGGAATACTACAATCCTACTAATTTCATAAATTATGATCACCATGTCAATGTGGGAGTACATCATAATATGGAAAGCTCATCACCTCAAGTACTTATTCCAAACTTGGTTATGCAAGGTGATAGCTCCTCTTTTATTCGATTAGCAATGGATGCAAACAAAGCCTGCAGGCAGCTGGACAACAAATAGCTCCATATCTGTGAAAATTAATTAAACTTCTTGTAGATATATATATCATCGGATAGTGATGACAANGACTACCATATATATGTAGATGTTGATGGTTTTATTATTATTGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00721	93238	96139	-

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000721s00027420.1	PF02365.10	NAM	71	211	7.20E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.541
SRR1783600	control	4.748
SRR1783602	moderate drought stress	4.936
SRR1811619	moderate drought stress	4.715

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.924
DRR006520	Root Summer glycyrrhizin high producing strain	2.024
DRR006521	Root Winter glycyrrhizin high producing strain	1.177
DRR006522	Root Winter glycyrrhizin high producing strain	1.098
DRR006523	Root Summer glycyrrhizin low producing strain	0.894
DRR006524	Root Summer glycyrrhizin low producing strain	0.813
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.492
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.249

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.634
SRR2868004	Drought Stress (root)	10.115
SRR2967015	Control (root)	8.497

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.458
SRR9715740	Leaf	10.967
SRR9715741	Leaf	8.935
SRR9715739	Root	1.121
SRR9715742	Root	5.913
SRR9715743	Root	5.114

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.022
SRR8749028	MeJA induced 9h	4.898
SRR8749029	MeJA induced 9h	6.230
SRR8749030	Uninduced	3.075
SRR8749031	Uninduced	2.232
SRR8749032	Uninduced	2.289

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.629
SRR8400027	Control - Root	14.614