Gene detail information of Glyur000721s00027415 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G46070.1 | 4.00E-141 | Guanylate-binding family protein |
| NR | XP_004505099.1 | 0 | PREDICTED: myosin-2 heavy chain-like [Cicer arietinum] |
| trEMBL | tr|V7CGT1|V7CGT1_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW28485.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00721 | 76393 | 81463 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000721s00027415.1 | PF02263.14 | GBP | 49 | 87 | 6.80E-05 |
| Glyur000721s00027415.1 | PF02263.14 | GBP | 89 | 157 | 1.40E-15 |
| Glyur000721s00027415.1 | PF02263.14 | GBP | 158 | 215 | 3.80E-08 |
| Glyur000721s00027415.1 | PF02841.9 | GBP_C | 255 | 482 | 2.00E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.459 |
| SRR1783600 | control | 7.227 |
| SRR1783602 | moderate drought stress | 10.535 |
| SRR1811619 | moderate drought stress | 10.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.282 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.758 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.133 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.425 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.776 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.957 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.080 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.389 |
| SRR2868004 | Drought Stress (root) | 10.586 |
| SRR2967015 | Control (root) | 12.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.658 |
| SRR9715740 | Leaf | 3.832 |
| SRR9715741 | Leaf | 4.186 |
| SRR9715739 | Root | 0.641 |
| SRR9715742 | Root | 7.493 |
| SRR9715743 | Root | 5.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.168 |
| SRR8749028 | MeJA induced 9h | 7.668 |
| SRR8749029 | MeJA induced 9h | 2.385 |
| SRR8749030 | Uninduced | 1.112 |
| SRR8749031 | Uninduced | 1.692 |
| SRR8749032 | Uninduced | 1.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.494 |
| SRR8400027 | Control - Root | 15.837 |