Gene detail

Gene detail information of Glyur000721s00027413

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35160.1	4.00E-41	O-methyltransferase family protein
NR	Q84KK6.1	0	RecName: Full=Isoflavone 4'-O-methyltransferase; Short=GeHI4'OMT; AltName: Full=2,7,4'-trihydroxyisoflavanone 4'-O-methyltransferase; AltName: Full=S-adenosyl-L-methionine:2,7,4'-trihydroxyisoflavanone 4'-O-methyltransferase [Glycyrrhiza echinata]
COG	YP_007203445.1	7.00E-31	methylase [Singulisphaera acidiphila DSM 18658]
Swissprot	tr\|Q84KK6\|I4OMT_GLYEC	0	Isoflavone 4'-O-methyltransferase
trEMBL	tr\|A0A072UPM0\|A0A072UPM0_MEDTR	0	Isoflavone-7-O-methyltransferase {ECO:0000313\|EMBL:KEH30963.1}

Sequence

Transcript Sequence

>Glyur000721s00027413.1
CCTCCTAATAATGCCTCAAGATTCGCACACCGCAGACCAAGACCACGAGACAACAAGATAAGGCACATTACTTTAGTTTGTTTTGATCTGCAGAGTACTATAGAGTTTGACTAGTCTGATCTCCATTTCAAACATTTATAAAAGCTGCACACTAGTTTTGTGTAGTACTAGTACTTCAAATCCATATACACACATCCAAAAAAAAAAGAAAATTTTAAAAACAAAAAAAAAATGGATTTCAGTACCAATGGCAGTGAAGAAAGTGAACTGTACCATGCTCAAATCCATCTCTACAAGCATGTCTACAACTTCGTAAGCTCCATGGCTCTCAAATCCGCTATGGAGCTAGGCATAGCAGATGTAATCCACAACCACGGCAAACCCATCACTCTTCCCCAATTAGCCTCAGCCTTGAAACTCCACCCTTCCAAAGTCGGTGTCCTCTACCGGTTCCTGCGTCTTCTAACACACAACGGGTTCTTCGCCAAAACAACAGTTCCATCACAGAATGGCAAAGAAGGGGAAGAAGAAGAAACAGCATATGCTTTAACACCCCCATCAAAGCTTCTTGTTAAAGGAAAGCCAACTTGTTTGGCATCAATTGTTCGTGGAGCACTTCATCCAAGTTCTCTGGACATGTGGCGATCCTCTGAGAAATGGTTCAACGAGGACAAGGAGCTTACCCTGTTTGAGAGCGCAACAGGGGAGAGTTTCTGGGACTTTCTCAACAAGGATTCTGAATCTGGTACACTGAGCATGTTTCAAGAAGCCATGGCTGCTGATTCTCAAATGTTCAAGCTTGCCCTCAAGGAGTGTAGGCATGTGTTTGAGGGTTTGGAGTCTCTTGTTGATGTTGGAGGTGGGACTGGTGGTGTCACAAAACTCATCCATGAAGAATTTCCTCACCTCAAATGCACAGTTTTTGACCAACCACAGGTTGTGGGTAACTTGTCTGGGAATGAAAACTTGAAATTTGTTGGTGGAGATATGTTCAAGTCTATCCCTCCTGCAGATGCAGTTTTACTCAAGTGGGTTCTGCATGATTGGAATGATGAACTCTCCTTGAAGATATTGAAGAACAGCAAAGAAGCTATTTCTGGGAAAGGGAAAGAAGGGAAGGTGATTATCATAGACATATCGATTGATGAAGCAAGCGGTGATCGCGAATTGACCGAGTTGCAACTGGACTATGACTTGGTGATGTTGACTATGTTCAATGGAAAAGAAAGAGAGAAGAAAGAGTGGGAGAAACTCATATCCGATGCAGGGTTCAGCAGCTACAAGATTACCTCCATTTGTGGCTTCAAGTCCCTGATCGAAGTTTTTCCTTAATTTTTTTAATTAGAAGCTGCTGCATATCAATTAAGTTATGCTACGAATTCAATAAGTTTCTACTCCAGGGTCAAATCAGTAGTTTTTGTTGCGGCATATTAGAAATTAATTTCCCAAGTTTGGTCTTTGCACAGGGATCATTATTCCCACCCCCTTCCGTACATCTCAAAAGCAAAAAAAAGAAGGCCCTGTTAGTTTCTGAAAAACAGAGAAAGTTCAATCTATTTAAAACAAATTTGTTTGAGAGCGTTACAAAATAAAAAGCTTACGGAGTGTGATCCACCCTCAACTCATATTTCTTCAGATTTTCCCCCAGTTTCATACTATAGGAAGTATTACATGCTTCAAAAAGTGAGTGATATTTATCAAAACAGAAGTGCTATTGGTATGTATTCATGACAAAAAGGAACAATTATTTAAGTCAAAAATATGTATTTTTGTTAAGAAAGTGACATTTTTACGACAAAGTACTTGCACATATTTATAGCAACACTCTAATTTAATAAGGTAATTACTATAATACAGTTCAAGCTGATAGAATACTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00721	49390	51507	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0008168 methyltransferase activity

GO:0008171 O-methyltransferase activity

GO:0046983 protein dimerization activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000721s00027413.1	PF08100.6	Dimerisation	31	79	2.40E-18
Glyur000721s00027413.1	PF00891.13	Methyltransf_2	100	343	1.10E-79

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	146.814
SRR1783600	control	146.913
SRR1783602	moderate drought stress	131.627
SRR1811619	moderate drought stress	132.107

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.890
DRR006520	Root Summer glycyrrhizin high producing strain	5.838
DRR006521	Root Winter glycyrrhizin high producing strain	35.806
DRR006522	Root Winter glycyrrhizin high producing strain	34.851
DRR006523	Root Summer glycyrrhizin low producing strain	16.448
DRR006524	Root Summer glycyrrhizin low producing strain	17.081
DRR006525	Leaf Summer glycyrrhizin high producing strain	55.975
DRR006526	Leaf Summer glycyrrhizin high producing strain	55.996

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	115.051
SRR2868004	Drought Stress (root)	134.934
SRR2967015	Control (root)	81.574

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	121.691
SRR9715740	Leaf	34.145
SRR9715741	Leaf	238.422
SRR9715739	Root	38.031
SRR9715742	Root	70.422
SRR9715743	Root	64.921

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.044
SRR8749028	MeJA induced 9h	22.069
SRR8749029	MeJA induced 9h	8.033
SRR8749030	Uninduced	302.901
SRR8749031	Uninduced	85.549
SRR8749032	Uninduced	50.281

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	187.419
SRR8400027	Control - Root	103.671