Gene detail

Gene detail information of Glyur000720s00020701.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G46950.1	2.00E-170	cytochrome P450, family 709, subfamily B, polypeptide 2
NR	KEH43175.1	0	cytochrome P450 family 709 protein [Medicago truncatula]
COG	YP_001522424.1	2.00E-52	cytochrome P450 family protein [Acaryochloris marina MBIC11017]
Swissprot	tr\|O48786\|C734A_ARATH	5.00E-141	Cytochrome P450 734A1
trEMBL	tr\|A0A072VYL9\|A0A072VYL9_MEDTR	0	Cytochrome P450 family 709 protein {ECO:0000313\|EMBL:KEH43175.1}

Sequence

Transcript Sequence

>Glyur000720s00020701.1
ACTTGGAATAATCTTGTAGCAATCTGTCTGTTTCTACTTTCTTCTGCTGCCTCTCTCTCTCTCTCTCTTTCTCACACAGAATTATACACCCAAAAATCAAAATGGGATATCTGATTGCTGTTGCCATGGCTATCACTTTTACTGTTATTATCATGTCAAAGATTTGGGAAATCTGTATGGTTCTGTTTTGGAGGCCATATGCCCTGACTAGGCACTTTCGGAAGCAAGGACAAGGAGTCATGGGGCCACCTTACTCCCTTGTTTCTGGTTCTCTCAATGAAATCAAAACAATGATGAGGGATGCAAGGAAAGTTGCCATGGATAGACACTCACATGATATTACTCGAAGGGTTCTTCCTCACTACCAAAAATGGTCCTCCTTATATGGGGAGACATTTCTATATTGGTTTGGAACAAAACCGAGGATTTGCATCCTTGATGCTGAGCTGGCCAAAGAGATTTTATCAAACAAGTTCGGTTTCTATGGAAAACCCAAATCAAGGCCTTCNATAGTAACCATGGTAGGAGAGGGGTTGGTTCTGGTCAATGGATTGGAGTGGGTTAAGCGCAGAAGGATACTCAGTCCTGCCTTCTCCATCGATAAATTGAAGGTTATGATAAGTGGGATGGCAGCATGTACCATTTCCATGCTGGATGAGTGGAAAAGTCAAGTCAATGAAGCCAAGAACAAATTCAAGAGAATAGAGGTGAGTCAAGAATTTCGAGACCTAACAGCAGATATAATCGCCCACACTGCCTTTGGTAGCAGCTTTGTTCAAGGAAGGGAAGCCTTTAANGCACAAACAGAACTTCAAAACCATTGTGTAGCTTCAAGTGTTGACATTTTCATTCCTGGCAGCCAATATTTTCCTACTCAGTCAAATCTTAAGATGTGGAAGCTTGATNGGAAAATGAAGAAATCACTAAAGCGCATTATAGAAAGTAGATTGCATTCTCAATCATCAGATTGCTCTTATGGAGATGATCTACTTGGTGTAATGATGGNTACTGAGAAAACAAATGCTGGTCCTAAGTTGAAGATGAATGAAATCATGGAAGAATGCAAGACCTTTTTCTTTGCTGGTCATGAAACCACTTCAAACTTGCTTACTTGGACTGTCTTCTTGTTGAGTTTACACAATGAATGGCAAGACAAACTCAGACAGGAGATCTTGCACAACTGTGGCATGGAAATTCCTGATGCAGATATGCTATCAAAGTTAAAATTGGTGAATATGGTATTGCTGGAAGCGTTAAGGTTGTATTGCCCTGTGATAANCCTAGTCAGAGTGGCTTCGGAGGACATGAAATTGGGGAATTTGTTGATCCCGAAAGGAACATGTGTTACAATCCCAATTACAATGATTCACAGGAGCAAAGAATACTGGGGTGAAGATGCAAATGAGTTCAATCCACTGAGATTCATGAATGGAGTCTCTAAGGCCGCAAAGCACCCAAATGCTCTACTTGCCTTTTCGGTGGGTCCAAGAAATTGCATTGGTCAGAACTTTGCTATGCTGGAAGCGAAGACAGTGATGGCTTTAATTCTTCAAAGGTTTTCTTGGTCNCTTTCCCCTGACTATGAACATTCACCTGTGAACCACCTCACATTGCAGCCACAACATGGCCTTCCCATCATTGTAAAACCTTTGCAACTGTAATTCTTAATTAGCTTCTTTCCCTCGTACGTGCTTTTTGTTCATTCCACACCTAGCTACTTGTTTCTATACTTTCTGGATCATTGGCTACAAAATNTTGAGATGAATGCAATCTGTTTACAGTTGCGCCTAGTGTCCTCGTGCAGCCCTGTGTCTATTTACACTATTTCTCTCTTCATGTGATCACGTGAAAAAATTTCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00720	112307	115657	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP709B2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000720s00020701.1	PF00067.17	p450	88	502	5.70E-85

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.557
SRR1783600	control	8.574
SRR1783602	moderate drought stress	17.989
SRR1811619	moderate drought stress	18.225

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.717
DRR006520	Root Summer glycyrrhizin high producing strain	17.598
DRR006521	Root Winter glycyrrhizin high producing strain	12.520
DRR006522	Root Winter glycyrrhizin high producing strain	11.808
DRR006523	Root Summer glycyrrhizin low producing strain	67.045
DRR006524	Root Summer glycyrrhizin low producing strain	68.027
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.971
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.893

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.636
SRR2868004	Drought Stress (root)	39.201
SRR2967015	Control (root)	28.890

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	37.239
SRR9715740	Leaf	68.773
SRR9715741	Leaf	156.003
SRR9715739	Root	8.184
SRR9715742	Root	12.568
SRR9715743	Root	10.381

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	88.428
SRR8749028	MeJA induced 9h	169.451
SRR8749029	MeJA induced 9h	291.588
SRR8749030	Uninduced	142.780
SRR8749031	Uninduced	265.641
SRR8749032	Uninduced	321.609

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	39.229
SRR8400027	Control - Root	32.605