Gene detail

Gene detail information of Glyur000720s00020693

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G01650.2	5.00E-65	Polyketide cyclase / dehydrase and lipid transport protein
NR	XP_004495840.1	9.99E-138	PREDICTED: uncharacterized protein LOC101510907 [Cicer arietinum]
COG	YP_007147781.1	4.00E-27	oligoketide cyclase/lipid transport protein [Cylindrospermum stagnale PCC 7417]
trEMBL	tr\|I1LAW0\|I1LAW0_SOYBN	7.00E-135	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G28000.1}

Sequence

Transcript Sequence

>Glyur000720s00020693.1
ATTCCAACCTCCTCAGAATCACACACTGCTTTTCTATTCCCTCAACCAGCTCCTTCTTCCTGTTCTAATTCCATTTCCATAATAACCCATTCCTCCCTCTTANTCCCTTTGCACCCTTTTCACTTCAAGGCCCACTGTTCCCTCTGCACCCCACCTTCTCCCAAACCATCACGCTCCTTCAAGTTCAGACCTTTCTTGTATCGCGCCTCCAAACCCGACCCCACNACTTTGGACGATGACGATTATTCTGGGAATTTGTTGGTGGCAGAGGATGATGGGGTTGATGAAGAGTCAGAGTCCTTGGCAGAGGATGGGGTGTACATAGAGATGACGAAGCTGGAGAAGAACTCACGCAGAATCCAATCCAGGATTTCCATTGACGCTTCGCTTGATGCCGTTTGGAGCATCTTGACCGATTATGAGAGGTTGGCTGATTTCATTCCTGGCCTTGCTGTTAGCCAATTGCTCCAAAAGGGTGACAAATTTGCTCGCCTTTTGCAGATTGGACAGCAGAACTTTGCATTTGGGATAAAATTCAATGCTAAAGGAGTTGTAGACTGNTATGAGAAAGAATTGGAGACTCTTCCTTCTGGTATGAAGCGTGAAATTGAATTCAAGATGGTTGAAGGAGATTTTCAACTCTTNGAAGGAAGATGGTCTATTTTGCAGCTGTTCAGCAGCGGATGTTGTGAGGAGTCTCAAACCCGAGAAGTGAATACGACTCTCTCATACANTGTTGATGTTAAGCCGAAGCTGTGGTTGCCTGTTCGTCTCATAGAGGGTAGACTTTGCAGTGAGATAAAAAAGAACCTTACATCCATCAGGGGCGAAGCTCAGAAAGNCACTGACAGAACTGTGCATACAGATCAATTCGAATGAGTTATGCAAATATCATAGAAAAAATGAATACAAGTAAAGTTGTTCACTCCTCAATTCTCACCTTGTGAAGCTGCAAACTTGGTCTTATTATGCCCCTTGAATATCTTCAAGATCTGGACTGGACTGGACCACAATGATCAAATATTAATCATGAGAATTCATNAGAATACACAATTCTATAGGATCATTACAATTATAGTGATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00720	57670	61200	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000720s00020693.1	PF03364.15	Polyketide_cyc	126	274	8.70E-22

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.556
SRR1783600	control	8.125
SRR1783602	moderate drought stress	6.423
SRR1811619	moderate drought stress	6.681

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.373
DRR006520	Root Summer glycyrrhizin high producing strain	7.723
DRR006521	Root Winter glycyrrhizin high producing strain	4.405
DRR006522	Root Winter glycyrrhizin high producing strain	3.995
DRR006523	Root Summer glycyrrhizin low producing strain	6.142
DRR006524	Root Summer glycyrrhizin low producing strain	6.708
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.629
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.069

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.741
SRR2868004	Drought Stress (root)	7.992
SRR2967015	Control (root)	8.681

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.953
SRR9715740	Leaf	20.204
SRR9715741	Leaf	17.717
SRR9715739	Root	3.050
SRR9715742	Root	4.382
SRR9715743	Root	5.059

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.251
SRR8749028	MeJA induced 9h	2.226
SRR8749029	MeJA induced 9h	1.570
SRR8749030	Uninduced	2.064
SRR8749031	Uninduced	0.798
SRR8749032	Uninduced	1.010

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.150
SRR8400027	Control - Root	9.094