Gene detail information of Glyur000720s00020692 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62020.1 | 1.00E-75 | germin-like protein 10 |
| NR | ACG69492.1 | 5.24E-133 | germin-like protein 16 [Glycine max] |
| COG | YP_006983085.1 | 8.00E-11 | oxalate decarboxylase family bicupin [Gluconobacter oxydans H24] |
| Swissprot | tr|Q9M263|GL24_ARATH | 2.00E-99 | Germin-like protein subfamily 2 member 4 (Precursor) |
| trEMBL | tr|C7S8D0|C7S8D0_SOYBN | 2.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G28010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00720 | 53183 | 54426 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000720s00020692.1 | PF00190.17 | Cupin_1 | 59 | 202 | 1.30E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.028 |
| SRR1783600 | control | 13.121 |
| SRR1783602 | moderate drought stress | 9.438 |
| SRR1811619 | moderate drought stress | 9.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.239 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.104 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.302 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.837 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.719 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.486 |
| SRR2868004 | Drought Stress (root) | 11.658 |
| SRR2967015 | Control (root) | 16.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.205 |
| SRR9715740 | Leaf | 8.049 |
| SRR9715741 | Leaf | 3.168 |
| SRR9715739 | Root | 6.962 |
| SRR9715742 | Root | 54.077 |
| SRR9715743 | Root | 46.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.078 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.999 |
| SRR8400027 | Control - Root | 49.692 |