Gene detail information of Glyur000720s00020688 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03050.1 | 2.00E-26 | |
| NR | KEH32260.1 | 4.13E-68 | knotted 1-binding protein [Medicago truncatula] |
| trEMBL | tr|A0A072V2C5|A0A072V2C5_MEDTR | 2.00E-68 | Knotted 1-binding protein {ECO:0000313|EMBL:KEH32260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00720 | 43588 | 44306 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.868 |
| SRR1783600 | control | 0.855 |
| SRR1783602 | moderate drought stress | 0.672 |
| SRR1811619 | moderate drought stress | 0.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.087 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.543 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.413 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.190 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.076 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.465 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.631 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.987 |
| SRR2868004 | Drought Stress (root) | 2.828 |
| SRR2967015 | Control (root) | 2.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.031 |
| SRR9715740 | Leaf | 1.733 |
| SRR9715741 | Leaf | 1.292 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.387 |
| SRR9715743 | Root | 0.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.496 |
| SRR8749028 | MeJA induced 9h | 4.030 |
| SRR8749029 | MeJA induced 9h | 2.204 |
| SRR8749030 | Uninduced | 3.052 |
| SRR8749031 | Uninduced | 1.154 |
| SRR8749032 | Uninduced | 1.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.140 |
| SRR8400027 | Control - Root | 1.462 |