Gene detail information of Glyur000720s00020686 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62010.1 | 0 | |
| NR | AES61538.2 | 0 | metal ion-binding protein [Medicago truncatula] |
| trEMBL | tr|G7IAF7|G7IAF7_MEDTR | 0 | Metal ion-binding protein {ECO:0000313|EMBL:AES61538.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00720 | 25571 | 36751 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000720s00020686.1 | PF14566.1 | PTPlike_phytase | 89 | 243 | 1.70E-49 |
| Glyur000720s00020686.1 | PF14566.1 | PTPlike_phytase | 507 | 663 | 8.10E-50 |
| Glyur000720s00020686.1 | PF14566.1 | PTPlike_phytase | 948 | 1103 | 1.00E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.945 |
| SRR1783600 | control | 2.893 |
| SRR1783602 | moderate drought stress | 3.525 |
| SRR1811619 | moderate drought stress | 3.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.617 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.678 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.564 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.434 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.269 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.302 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.807 |
| SRR2868004 | Drought Stress (root) | 21.944 |
| SRR2967015 | Control (root) | 22.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.414 |
| SRR9715740 | Leaf | 11.770 |
| SRR9715741 | Leaf | 15.080 |
| SRR9715739 | Root | 1.111 |
| SRR9715742 | Root | 5.858 |
| SRR9715743 | Root | 5.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.178 |
| SRR8749028 | MeJA induced 9h | 4.821 |
| SRR8749029 | MeJA induced 9h | 2.535 |
| SRR8749030 | Uninduced | 3.280 |
| SRR8749031 | Uninduced | 2.293 |
| SRR8749032 | Uninduced | 2.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.611 |
| SRR8400027 | Control - Root | 7.692 |