Gene detail information of Glyur000720s00020683 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26731.1 | 4.00E-07 | |
| NR | XP_003591281.1 | 1.52E-55 | hypothetical protein MTR_1g085240 [Medicago truncatula] |
| trEMBL | tr|G7IAF1|G7IAF1_MEDTR | 6.00E-56 | Uncharacterized protein {ECO:0000313|EMBL:AES61532.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00720 | 4876 | 5734 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.095 |
| SRR1783600 | control | 3.022 |
| SRR1783602 | moderate drought stress | 3.845 |
| SRR1811619 | moderate drought stress | 3.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.889 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.809 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.950 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.823 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.174 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.053 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.587 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.204 |
| SRR2868004 | Drought Stress (root) | 32.423 |
| SRR2967015 | Control (root) | 32.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.749 |
| SRR9715740 | Leaf | 2.756 |
| SRR9715741 | Leaf | 2.589 |
| SRR9715739 | Root | 5.839 |
| SRR9715742 | Root | 5.617 |
| SRR9715743 | Root | 5.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 78.481 |
| SRR8749028 | MeJA induced 9h | 80.151 |
| SRR8749029 | MeJA induced 9h | 185.462 |
| SRR8749030 | Uninduced | 165.145 |
| SRR8749031 | Uninduced | 406.233 |
| SRR8749032 | Uninduced | 336.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.306 |
| SRR8400027 | Control - Root | 8.903 |