Gene detail

Gene detail information of Glyur000719s00020082.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G37830.1	oxoprolinase 1
NR	XP_004504835.1	PREDICTED: LOW QUALITY PROTEIN: 5-oxoprolinase-like [Cicer arietinum]
COG	YP_007467122.1	N-methylhydantoinase B/acetone carboxylase, alpha subunit [Desulfocapsa sulfexigens DSM 10523]
Swissprot	tr\|Q9FIZ7\|OPLA_ARATH	5-oxoprolinase
trEMBL	tr\|G7JV66\|G7JV66_MEDTR	5-oxoprolinase {ECO:0000313\|EMBL:AES90614.1}

Sequence

Transcript Sequence

>Glyur000719s00020082.1
ATGGGGAGTGTTATTGAAGGGAAGTTAAGGTTTTGTATAGACAGAGGCGGCACCTTCACCGATGTTTATGCAGAAATCCCGGGTCGGCCTGATGGGCGAGTTTTGAAGCTTTTGTCAGTTGATCCTTTAAACTATGATGATGCACCAGTTGAAGGGATACGGAGGATCCTTGANGAATTCACTGGTGAGAAAATTTTGCGCAACTCAAAAATACCCACCGAGAAGATTGAGTGGATAAGGATGGGTACAACTGTGGCAACAAATGCACTTCTAGAGCGAAAGGGAGAAAGGATTGCTGTGTGTGTGACTCAAGGCTTTCGTGATTTGCTCCAGATCGGTAACCAGGCTCGCCCCAACATATTTGACCTTACTGTGTCAAAGCCATCAAATCTCTATGAAGAGGTTGTAGAGGTGGAAGAGAGAGTTGAGCTTGTTCAGACAAAGGAAGAAGAGAATCAGGGTGCTTCTTCATCACTTGTTAAAGGAATTTCTGGAGAGCTTATCAGGATTGTAAAGCCTCTCAATGAAGAAGTGTTGAAGCCTGTACTGAAAAATTTGCTGGAGAAAGGAATTAGTTGTTTGGCTGTTGTTTTGATGCACTCATACACTTATCCACAGCATGAACAACAGGTTGAGAAGTTAGCTTTGAGTCTGGGATTCAGACATGTTTCTATATCATCTGCTTTGACTCCCATGGTCCGTGCTGTTCCTCGTGGTCTAACAGCCAGTGTAGACGCTTATCTGACCCCAGTTATTAAAGAATACCTGTCAGGATTCATCTCCAAATTTGATGAGGGATTTGGAAAGTTGAATGTTTTGTTTATGCAATCAGATGGAGGGCTTGCACCAGAGAGTACCTTCTCAGGGCACAAAGCAATTCTGTCTGGCCCAGCTGGTGGAGTTGTTGGTTACTCACAAACTCTTTTCAGNCTTGAAACAGATAAGCCCTTAATTGGCTTTGATATGGGAGGCACATCTACAGATGTGAGTCGATATGCTGGAAGTTATGAGCAAGTGCTGGAAACCCAAATTGCTGGCACCATAATTCAAGCACCTCAGCTTGACATAAACACCGTGGCTGCTGGTGGTGGTTCAAAGTTGAAGTTCCAATTTGGTGCTTTTCAAGTTGGACCAGAATCGGTTGGAGCACACCCAGGTCCTGTATGTTATCGGAAAGGTGGAGAGTTGGCAATTACAGATGCCAACTTAATTTTGGGATATGTCATTCCTGATTATTTCCCATCCATATTTGGACCAAATGAAGACCAGCCTCTTGATGTCAAGTCAACAAGAGAAGAATTTGAGAAGCTTGCCAGGCAAATAAATGCTTATCGAAAGAATCATGATCCATCTGCAAAAGACATGACAGTGGAAGAGATTGCACTTGGCTTTGTGGATGTTGCTAATGAGACAATGTGTCGTCCAATAAGGCAGTTGACTGAAATGAAGGGGCATGAGACAAAGAACCATGCACTTGCTTGCTTTGGAGGTGCTGGACCTCAGCATGCTTGTGCTATAGCTAGGTCATTAGGCATGAAAGAAGTGCTCATTCACAAATTTTGTGGGATCTTAAGTGCATATGGAATGGGATTGGCAAATGTTGTAGAAGAGGCACAGGAGCCTTATTCTGCAGTTTATGGAACTGAATCTACTATTGAGGCTTCACAACGAGAAGNTGTGTTACTGAGACAAGTAAAGCAGAAGTTACAAAGTCAAGGATTTAAAGAGGAAAACATTTCAATAGAGACATATTTAAACTTGAGATATGAAGGTACAGATACTGCCATCATNGTCAAAAGACAAATAGCTGAAGATGGAATATTATGTGACTATGCTACTGAGTTTGNGAAACTGTTTCAGCAGGAGTATGGCTTTAAACTCCAGAACAGAAATATTGTGATTTGTGATGTTAGAGTTCGTGGTATAGGAGTTACCAATATATTGAGGCCAAAGGCCATAGAACCTGCCTCTGGCAGTCCTATAGTTGAAGGCTACTATAAGGTTTACTTTGGAAGTGGTTGGCAGGAAACACCTCTCTATAAGCTTGAAAAACTGGGGTATGGCCATATGATGTCCGGCCCAGCAATCATCATGAATGGTAATAGCACTGTGATTGTAGAACCCAACTGTAGAGCCATTATAACCAAATATGGAAACATCAAGATTGAAATCGATTCACCTTTGAGCAGTATTAAAATATCAGATAAAGTTGCAGATGTTGTGCAGCTCTCCATCTTCAATCACAGATTTATGGGTATAGCTGAGCAGATGGGACGGACTTTGCAAAGAACTTCAATTTCAACAAATATCAAAGAGCGGCTTGATTTTTCTTGTGCTCTATTTGATCCTAATGGGGGCCTAGTTGCAAATGCACCTCATGTTCCTGTCCATCTAGGAGCTATGTCTACCACAGTTCGCTGGCAGCTCAATTACTGGGGTGACAATTTAAATGAAGGGGATGTTTTGGTTACTAATCATCCTTCAGCTGGAGGTAGCCATCTTCCTGACATAACTGTTGTTACACCCGTTTTTTTCAATGGGAAGTTGGTATTTTTTGTTGCAAACAGAGGGCATCATGCAGAGATTGGTGGTATTACTCCTGGAAGCATGCCTCCATTTTCAAAGTCCATATTGGAGGAAGGAGCTGNCATTAAGGCATTTAAGCTTGTTGAAAGAGGCGTCTTTCAAGAAGAGGGGATTGTTAAACTTCTAAAGTTCCCAAGCTCTGATGACCAGGGAAATAAGATCCCAGGAACTCGCAGGATTGAAGATAACTTATCCGATCTGCGAGCACAAGTAGCAGCAAATCAGAGAGGAATTTCTCTAGTCCAAGAGCTTATTGAGCAGTATGGACTGGAAACCGTTCAGGCTTACATGAATTATGTACAGATGAATGCAGAAGAGGCAGTAAGAGAGATGCTGAAGTCAGTCGGTCGTAGAATTTCATCAGAGTCAAATGAAAACTGTGTGACTATTGAAGAAGAGGACTACATGGATGATGGATCTGTTATTCATTTGAAACTGAGCATTGACTCCAGCAAAGGAGAAGCAGTTTTTGATTTTGGGGGGACAAGCGCAGAAGTCTATGGTAATTGGAATGCACCAGAAGCTGTAACGGCTGCAGCTGTCATATATTGTGTTCGCTGTTTAGTGGATGTTGATATTCCTCTCAATCAAGGCTGTTTGGCTCCAGTGAAGATTCTTATTCCAGAAGGCTCATTTCTCTCTCCCAGTGATAGTGCTGCTGTAGTAGGGGGTAATGTCCTTACATCTCAGAGAATCACTGATGTTGTATTCACTGCATTCCAGGCTTGTGCTTGTTCACAAGGTTGTATGAATAATCTCACATTCGGAGATGATACTTTTGGGTACTATGANACCATTGGAGGTGGGAGTGGGGCTGGTCCTACATGGGATGGCACAAGTGGGATACAGTGCCACATGACAAACACAAGAATGACTGATCCAGAGATATTTGAGCAAAGATATCCANTAATTCTCCACAAGTTTGGACTTAGAGAAAACAGTGGGGGAGATGGATTTCACAGAGGTGGTGATGGGCTTCTCAGGGAAATAGAATTTAGGNGCCCGGTTACTGTTAGCATTCTTTCTGAGAGACGTGCCCATGCACCAAGAGGGCTGAAGGGAGGGAAAGACGGTGCGCGTGGTGCTAACTACCTTGTAAAGAAAGATAAACGAAAGATTTATCTCGGCGGTAAGAATTCTGTTGAGGTGCTTCCAGGGGAAATTCTTCAGATTTTGACTCCTGGTGGTGGTGGATGGGGTTCTCCAGTGTAA

Protein Sequence

>Glyur000719s00020082.1
MGSVIEGKLRFCIDRGGTFTDVYAEIPGRPDGRVLKLLSVDPLNYDDAPVEGIRRILXEFTGEKILRNSKIPTEKIEWIRMGTTVATNALLERKGERIAVCVTQGFRDLLQIGNQARPNIFDLTVSKPSNLYEEVVEVEERVELVQTKEEENQGASSSLVKGISGELIRIVKPLNEEVLKPVLKNLLEKGISCLAVVLMHSYTYPQHEQQVEKLALSLGFRHVSISSALTPMVRAVPRGLTASVDAYLTPVIKEYLSGFISKFDEGFGKLNVLFMQSDGGLAPESTFSGHKAILSGPAGGVVGYSQTLFXLETDKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGTIIQAPQLDINTVAAGGGSKLKFQFGAFQVGPESVGAHPGPVCYRKGGELAITDANLILGYVIPDYFPSIFGPNEDQPLDVKSTREEFEKLARQINAYRKNHDPSAKDMTVEEIALGFVDVANETMCRPIRQLTEMKGHETKNHALACFGGAGPQHACAIARSLGMKEVLIHKFCGILSAYGMGLANVVEEAQEPYSAVYGTESTIEASQREXVLLRQVKQKLQSQGFKEENISIETYLNLRYEGTDTAIXVKRQIAEDGILCDYATEFXKLFQQEYGFKLQNRNIVICDVRVRGIGVTNILRPKAIEPASGSPIVEGYYKVYFGSGWQETPLYKLEKLGYGHMMSGPAIIMNGNSTVIVEPNCRAIITKYGNIKIEIDSPLSSIKISDKVADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFDPNGGLVANAPHVPVHLGAMSTTVRWQLNYWGDNLNEGDVLVTNHPSAGGSHLPDITVVTPVFFNGKLVFFVANRGHHAEIGGITPGSMPPFSKSILEEGAXIKAFKLVERGVFQEEGIVKLLKFPSSDDQGNKIPGTRRIEDNLSDLRAQVAANQRGISLVQELIEQYGLETVQAYMNYVQMNAEEAVREMLKSVGRRISSESNENCVTIEEEDYMDDGSVIHLKLSIDSSKGEAVFDFGGTSAEVYGNWNAPEAVTAAAVIYCVRCLVDVDIPLNQGCLAPVKILIPEGSFLSPSDSAAVVGGNVLTSQRITDVVFTAFQACACSQGCMNNLTFGDDTFGYYXTIGGGSGAGPTWDGTSGIQCHMTNTRMTDPEIFEQRYPXILHKFGLRENSGGDGFHRGGDGLLREIEFRXPVTVSILSERRAHAPRGLKGGKDGARGANYLVKKDKRKIYLGGKNSVEVLPGEILQILTPGGGGWGSPV

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00719	2165	5962	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01469	OPLAH, OXP1, oplAH	EC:3.5.2.9	Glutathione metabolism	map00480

Gene Ontology

molecular_function

GO:0003824 catalytic activity

GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000719s00020082.1	PF05378.8	Hydant_A_N	10	217	1.30E-58
Glyur000719s00020082.1	PF01968.13	Hydantoinase_A	238	537	1.40E-97
Glyur000719s00020082.1	PF02538.9	Hydantoinase_B	739	1262	2.30E-190

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.466
SRR1783600	control	10.516
SRR1783602	moderate drought stress	18.620
SRR1811619	moderate drought stress	18.882

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.818
DRR006520	Root Summer glycyrrhizin high producing strain	16.492
DRR006521	Root Winter glycyrrhizin high producing strain	10.704
DRR006522	Root Winter glycyrrhizin high producing strain	10.275
DRR006523	Root Summer glycyrrhizin low producing strain	12.426
DRR006524	Root Summer glycyrrhizin low producing strain	12.602
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.339
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.273

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.614
SRR2868004	Drought Stress (root)	18.382
SRR2967015	Control (root)	16.657

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.404
SRR9715740	Leaf	8.736
SRR9715741	Leaf	7.117
SRR9715739	Root	2.777
SRR9715742	Root	12.118
SRR9715743	Root	10.369

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.684
SRR8749028	MeJA induced 9h	9.230
SRR8749029	MeJA induced 9h	8.142
SRR8749030	Uninduced	8.882
SRR8749031	Uninduced	7.422
SRR8749032	Uninduced	6.741

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.871
SRR8400027	Control - Root	12.358