Gene detail information of Glyur000717s00025336 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29240.1 | 6.00E-31 | Protein of unknown function (DUF688) |
| NR | KHN48001.1 | 0 | hypothetical protein glysoja_015471 [Glycine soja] |
| trEMBL | tr|K7L648|K7L648_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G12331.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00717 | 102040 | 105113 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000717s00025336.1 | PF05097.7 | DUF688 | 4 | 441 | 1.10E-75 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.638 |
| SRR1783600 | control | 2.692 |
| SRR1783602 | moderate drought stress | 2.854 |
| SRR1811619 | moderate drought stress | 2.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.318 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.209 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.002 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.134 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.054 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.055 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.039 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.189 |
| SRR2868004 | Drought Stress (root) | 4.411 |
| SRR2967015 | Control (root) | 4.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.775 |
| SRR9715740 | Leaf | 1.232 |
| SRR9715741 | Leaf | 2.782 |
| SRR9715739 | Root | 0.087 |
| SRR9715742 | Root | 3.728 |
| SRR9715743 | Root | 3.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.210 |
| SRR8749028 | MeJA induced 9h | 0.113 |
| SRR8749029 | MeJA induced 9h | 0.059 |
| SRR8749030 | Uninduced | 0.098 |
| SRR8749031 | Uninduced | 0.247 |
| SRR8749032 | Uninduced | 0.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.377 |
| SRR8400027 | Control - Root | 5.670 |