Gene detail information of Glyur000717s00025331 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09850.1 | 5.00E-62 | xylem bark cysteine peptidase 3 |
| NR | BAA25899.1 | 5.57E-166 | Bd 30K [Glycine max] |
| COG | YP_504536.1 | 1.00E-18 | peptidase C1A, papain [Methanospirillum hungatei JF-1] |
| Swissprot | tr|P22895|P34_SOYBN | 1.00E-163 | P34 probable thiol protease (Precursor) |
| trEMBL | tr|O64458|O64458_SOYBN | 2.00E-166 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G12270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00717 | 72167 | 74027 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000717s00025331.1 | PF08246.7 | Inhibitor_I29 | 47 | 108 | 7.20E-16 |
| Glyur000717s00025331.1 | PF00112.18 | Peptidase_C1 | 144 | 352 | 1.00E-52 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.449 |
| SRR1783600 | control | 16.036 |
| SRR1783602 | moderate drought stress | 10.933 |
| SRR1811619 | moderate drought stress | 11.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.185 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.803 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.229 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.175 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.891 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.974 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.502 |
| SRR2868004 | Drought Stress (root) | 17.831 |
| SRR2967015 | Control (root) | 38.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 120.045 |
| SRR9715740 | Leaf | 50.002 |
| SRR9715741 | Leaf | 101.194 |
| SRR9715739 | Root | 5.926 |
| SRR9715742 | Root | 43.210 |
| SRR9715743 | Root | 34.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 116.841 |
| SRR8400027 | Control - Root | 53.282 |