Gene detail information of Glyur000717s00025329 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29195.1 | 9.00E-42 | |
| NR | XP_007159451.1 | 1.66E-61 | hypothetical protein PHAVU_002G238700g [Phaseolus vulgaris] |
| trEMBL | tr|V7CQB5|V7CQB5_PHAVU | 6.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:ESW31445.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00717 | 65622 | 66791 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000717s00025329.1 | PF14009.1 | DUF4228 | 2 | 123 | 9.20E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 69.056 |
| SRR1783600 | control | 69.107 |
| SRR1783602 | moderate drought stress | 92.408 |
| SRR1811619 | moderate drought stress | 92.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 94.600 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 91.203 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.988 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.172 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.018 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.369 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.696 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.641 |
| SRR2868004 | Drought Stress (root) | 8.831 |
| SRR2967015 | Control (root) | 10.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.610 |
| SRR9715740 | Leaf | 1.278 |
| SRR9715741 | Leaf | 2.193 |
| SRR9715739 | Root | 42.138 |
| SRR9715742 | Root | 28.467 |
| SRR9715743 | Root | 31.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.129 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.729 |
| SRR8400027 | Control - Root | 21.161 |