Gene detail information of Glyur000717s00025319 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29140.1 | 3.00E-44 | Pollen Ole e 1 allergen and extensin family protein |
| NR | AFK46977.1 | 1.53E-86 | unknown [Lotus japonicus] |
| Swissprot | tr|O49813|OLEE1_BETPN | 5.00E-63 | Olee1-like protein (Precursor) |
| trEMBL | tr|I3T385|I3T385_LOTJA | 6.00E-87 | Uncharacterized protein {ECO:0000313|EMBL:AFK46977.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00717 | 14633 | 15878 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000717s00025319.1 | PF01190.12 | Pollen_Ole_e_I | 31 | 121 | 6.00E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.418 |
| SRR1783600 | control | 0.428 |
| SRR1783602 | moderate drought stress | 0.222 |
| SRR1811619 | moderate drought stress | 0.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.186 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.242 |
| SRR2868004 | Drought Stress (root) | 1.642 |
| SRR2967015 | Control (root) | 2.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.361 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.830 |
| SRR9715742 | Root | 0.724 |
| SRR9715743 | Root | 0.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.329 |
| SRR8749028 | MeJA induced 9h | 8.667 |
| SRR8749029 | MeJA induced 9h | 7.343 |
| SRR8749030 | Uninduced | 3.912 |
| SRR8749031 | Uninduced | 3.647 |
| SRR8749032 | Uninduced | 6.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.712 |
| SRR8400027 | Control - Root | 2.817 |