Gene detail

Gene detail information of Glyur000717s00025317

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G29120.2	1.00E-150	Hydrolase-like protein family
NR	XP_004504301.1	0	PREDICTED: uncharacterized protein LOC101499907 isoform X1 [Cicer arietinum]
trEMBL	tr\|G7LIR3\|G7LIR3_MEDTR	0	Alpha/beta-hydrolase superfamily protein {ECO:0000313\|EMBL:AET04238.1}

Sequence

Transcript Sequence

>Glyur000717s00025317.1
ATGAACTTTTGCAGGTACAAACAGCAGACAGAGACACCAGGGCCTTAGAGCTCGAGCTATGAGTACTGTGACTCATGGAAAGTCTATTGCAAGTATGGGGAATTCGAAGAACGACCCTGATCATCTCCTTGTTCTTGTTCATGGTATCCTGGCTAGCACAGGGGACTGGACTTATGCAGAAGCAGAGTTGAAAAGGCGCCTTGGAAAGAATTTTCTAATTTATGTAAGTTCATCAAATTCTTATACTAAGACGTTTACTGGGATTGATGGAGCTGGAAAGCGATTAGCTGATGAAGTCTTGCAAGTTGTCAAAAAGACAAAGAGTCTGAAAAGAATCTCCTTTCTAGCCCACTCTTTAGGAGGCTTGTTTGCTAGATATGCAATTGGTGTGCTTTATTCACCCGATACCTATAATAGGGACCAACCTGGTGATCTTGCCGACAGCATGGCAGAAAATTCCCAAAGGACAAGTTTTTCCAAAGGAGGGATGATTGCTGGGTTGGAGCCAATTAATTTTATTACTTTAGCAACTCCACATCTTGGTGTAAGGGGNAAAAGGCAGCTTCCATTTCTGTTGGGTGTCCCAATACTAGAAAAAATTGCTGCACCGATAGCTCCTGTTTTTGTTGGTCGGACTGGTAGTCAGTTGTTCCTCACTGATGGTAAACCCGACAAACAACCTCTNCTTTTGAGAATGGCTTCTGATTGTGAAGATGGAAAGTTTCTATCTGCACTTGGAGCATTTAAATGTCGCATTGTTTATGCCAATGTTTCGTACGATCATATGGTTGGGTGGCGCACATCCTCTATAAGGAGGGAAACGGAGCTCAGTAAGCCTCCTCGCCAATCTTTGGATGGATACAAGCATGTGGTTGATGTTGAATACTATCCCCCAGTCCCTTCTGATGGCCCTCAGTTTCCTCCAGAAGCAGTGAAAGCAAAAGAAGCAGCACAGAATGCACCTGATACCCAGAAAACTGTGGANTATCATGAAATTATTGAAGAGGAGATCATACAGGGATTGCAACAGTTGGGATGGAAAAAAGTTGATGTCAGCTTCCACTCAGCATTCTGGCCTTTCTTTGCTCATAACAACATTCATGTGAAAAATGAATGGCTTCACAATGCTGGTGTAGGAGTAATTGCTCATGTTGCTGACAGCTTAAGACAACAAGAAGCATCANCAATTTTGGCTGCGAGCTTGTAACTAGTGTATGTAATTTCACTATGCCTGGGACATGACTAACTGNACGATACAAGCTGAAAACACCAGTCTTTTATTTTAGTAGTCACCACCAATGTATTCACATTTTATTATGATTATATATGTTCATGCAAGCATATAGTAGTTCTTAATTCTGATTATCATACAAGTTGGTAGAAAGATTCATTATCATACCAATGCAAACAAATTATGGTTGTTTGTGTGTTAAGATGACCGGCATCGAATGAATTCTCCCTGAAATTGGGAAGAAGTAGGAATGAACATCTGGGCTTCTACAAGCTCGGAGATGATCTCCATGAATTGTTTTGTCCTTNGTTATGTTACAATTGTCATCGACATAATTAACTTCGGCTGGCTNTTGAGTTTTGAGCTGTATGTCTAGCACTCGCTTGGGGTGTATTGTTAATTAATTGTCTCTATTTTCAACTTTCAACTTTGAGCTGTATGACTTATTAAAGGAAAAGGGAAAAGAATGTATAAATTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00717	1330	6439	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000717s00025317.1	PF05057.9	DUF676	18	248	2.00E-64
Glyur000717s00025317.2	PF05057.9	DUF676	18	248	1.20E-64

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.591
SRR1783600	control	14.793
SRR1783602	moderate drought stress	20.066
SRR1811619	moderate drought stress	19.895

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.670
DRR006520	Root Summer glycyrrhizin high producing strain	12.917
DRR006521	Root Winter glycyrrhizin high producing strain	20.411
DRR006522	Root Winter glycyrrhizin high producing strain	20.141
DRR006523	Root Summer glycyrrhizin low producing strain	10.493
DRR006524	Root Summer glycyrrhizin low producing strain	10.473
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.920
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.671

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.633
SRR2868004	Drought Stress (root)	33.384
SRR2967015	Control (root)	25.258

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	23.985
SRR9715740	Leaf	29.901
SRR9715741	Leaf	28.995
SRR9715739	Root	9.165
SRR9715742	Root	11.702
SRR9715743	Root	12.533

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	28.701
SRR8749028	MeJA induced 9h	45.253
SRR8749029	MeJA induced 9h	95.407
SRR8749030	Uninduced	43.621
SRR8749031	Uninduced	78.641
SRR8749032	Uninduced	90.448

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.838
SRR8400027	Control - Root	18.277