Gene detail information of Glyur000716s00026199 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66580.1 | 7.00E-07 | |
| NR | AFK38154.1 | 1.11E-62 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SD12|I3SD12_LOTJA | 4.00E-63 | Uncharacterized protein {ECO:0000313|EMBL:AFK38154.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00716 | 80766 | 81581 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000716s00026199.1 | PF14009.1 | DUF4228 | 1 | 118 | 5.30E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.332 |
| SRR1783600 | control | 11.410 |
| SRR1783602 | moderate drought stress | 9.590 |
| SRR1811619 | moderate drought stress | 9.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.399 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.918 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.010 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.355 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.153 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.599 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.235 |
| SRR2868004 | Drought Stress (root) | 39.800 |
| SRR2967015 | Control (root) | 34.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.547 |
| SRR9715740 | Leaf | 15.241 |
| SRR9715741 | Leaf | 25.785 |
| SRR9715739 | Root | 2.653 |
| SRR9715742 | Root | 3.013 |
| SRR9715743 | Root | 2.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.928 |
| SRR8749028 | MeJA induced 9h | 11.814 |
| SRR8749029 | MeJA induced 9h | 3.201 |
| SRR8749030 | Uninduced | 1.534 |
| SRR8749031 | Uninduced | 0.258 |
| SRR8749032 | Uninduced | 0.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.393 |
| SRR8400027 | Control - Root | 21.814 |