Gene detail

Gene detail information of Glyur000716s00026191

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14470.1	9.00E-101	NB-ARC domain-containing disease resistance protein
NR	XP_004491238.1	0	PREDICTED: putative disease resistance protein At3g14460-like isoform X1 [Cicer arietinum]
COG	YP_001660791.1	5.00E-15	apoptotic protease-activating factor 1 like [Microcystis aeruginosa NIES-843]
Swissprot	tr\|Q9LRR4\|R13L1_ARATH	7.00E-119	Putative disease resistance RPP13-like protein 1
trEMBL	tr\|V5TH04\|V5TH04_CICAR	0	NBS-LRR protein {ECO:0000313\|EMBL:AHB64351.1}

Sequence

Transcript Sequence

>Glyur000716s00026191.1
GAAAATCTTCCATGCGAAGTCGCTGCTGTGGGTGAAGCTTTTCTCTCTGCTTTCATTGAAGTTGTTCTCGACAGGCTNGCTTCTCCTGAGGTGGTCAACTTGATCCGTGGAAAGAAGCTTGACGATGGTTTGCTCCAAAGGTTGAAGAACACTCTGTATGCCGTGGAAGCCGTGCTCAATGATGCAGAGCAGAAACAGATCAAAGACTCGGCGGTGAACAAGTGGCTTAACGACCTCAAAGATGCTGTGTATGTGGCTGATGACCTCTTGGATCACATTTCTACGACTAAAGCTGAAACTCAGAGGAAGGAGGTGAGTACTACTACTACTACTACTAACTTCTTCTCTCGTTATTTCAACTTTCAAGACAGGGAAATGGTCAATAAGTTGGAAGACATAGTTGGAAGACTTGAATCCATTTTCAAGCTCAAAGATATTCTTGGTCTTAAAGAGATTGCGAGGGAGAACTACTCATCATGGAGGACTCCTTCAACGTNTCTNGAAGACGACGGATCTAATATATATGGTAGGGATGAAGACAAAAAGGCCATACTCAAATTGTTGTTAGAAGATGATAAGGGTGATGGTAAAGTATGTGTGATCCCCATAGTGGGCATGGGTGGGGTTGGAAAAACCACGTTAGCCCAATCGGTGTACAACGATGACAGTGTGAAGCGGAAATTTGATTCTCAAGCATGGGCTTGCGTTTCTGATGAATTTGATGTCTTAAAGGTTACAAAGACTCTCTTAGAGGCGGTTACGAGAACTGCTTGTAGCACAACTGACATAAATTCGCTTCATCTTGATTTGAAGGAGAAGTTGATGGGAAAGAAGTTTTTAATTGTTTTGGATGATGTGTGGACCGAGGATTATGTTGGTTGGAATTTTCTCATGAGGCCTCTTCGATGCGGAGCTGAGGGAAGTAAAATTCTTGTAACAACCCGTAGTGAGAAAGTTGCCTCTATGGTCCAGACTTTTGAAGGTTACTACCCTCTTAAACAATTGTCAGATGAAGATTGTTGGTCAGTATTTGCAAGCCACGCATTCCTTTCAGTTGAGTCGGGTGATAGTACGGATCTCAAACTGATTGGCAGAGAGATTGTTAGAAAATGTAAGGGATTGCCTTTAGCAGCACAATCACTCGGAGGCCTATTGCGAGGAAAGCGTGATATGAGGGACTGGAATAATGTACTAAATAGTAATATTTGGGAAATTTCTGAAAATGAGAGTAAGATCATTCCAGCACTGAGAATCAGTTACCATTATCTCCCTCCATATGTGAAACGCTGCTTTGTTTATTGTTCACTGTATCCTAAGGACTACGAATTGGGTTATGAGTATTTTAATGATTTAGCTTCGATATCATTTTTTCAACGTTCCGGAAGTGGTAGCGAGGATTTTGTGATGCATGATCTCGTGCACGATTTAGCAACATCAATTGGTGGAGAATTCTATTGTAGAACAGGAGTACTTGGGAAAGAAACCAAGGTTGGTAACAAGACTCGTCATTTGTCATGTAGCGAGTTCAGTGATTCAGTATTAGAAACTTGTGAAATTTTGGGTAGAGCAAAATCTCTAAGGACATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00716	43592	45480	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000716s00026191.1	PF00931.17	NB-ARC	178	446	1.20E-70

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.869
SRR1783600	control	2.009
SRR1783602	moderate drought stress	1.311
SRR1811619	moderate drought stress	1.386

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.665
DRR006520	Root Summer glycyrrhizin high producing strain	0.641
DRR006521	Root Winter glycyrrhizin high producing strain	1.359
DRR006522	Root Winter glycyrrhizin high producing strain	1.157
DRR006523	Root Summer glycyrrhizin low producing strain	0.691
DRR006524	Root Summer glycyrrhizin low producing strain	0.661
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.230
SRR2868004	Drought Stress (root)	14.432
SRR2967015	Control (root)	11.529

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.717
SRR9715740	Leaf	0.194
SRR9715741	Leaf	2.043
SRR9715739	Root	0.075
SRR9715742	Root	4.563
SRR9715743	Root	3.922

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.088
SRR8749028	MeJA induced 9h	6.553
SRR8749029	MeJA induced 9h	3.171
SRR8749030	Uninduced	0.863
SRR8749031	Uninduced	2.002
SRR8749032	Uninduced	1.360

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.261
SRR8400027	Control - Root	9.046