Gene detail

Gene detail information of Glyur000716s00026188

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G30020.1	0	PA-domain containing subtilase family protein
NR	XP_004487981.1	0	PREDICTED: subtilisin-like protease-like isoform X2 [Cicer arietinum]
COG	YP_004097803.1	2.00E-108	peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043]
Swissprot	tr\|O65351\|SUBL_ARATH	2.00E-104	Subtilisin-like protease (Precursor)
trEMBL	tr\|G7INL3\|G7INL3_MEDTR	0	Subtilisin-like serine protease {ECO:0000313\|EMBL:AES65305.2}

Sequence

Transcript Sequence

>Glyur000716s00026188.1
CACTCACTCCTTCGCTACTCCTCAGTACCATGGCAATGAAAGATGACCGTTAGATCTCCGATCAGCGCAACGAGAGAAGCTCGTGCACCCACCCGATATCCCTCTTCAATGGCGTGTACGTGAATCAACCTTGTGTGGTGGCGATCGTACTCGTACCTTTGAAAATTCGCAATGCGTAATTGAGTCGCGCTTATTTCTCAGCTCCACGCGCTTTTTCCGAGTACTTGCTACTCGGATCCAAGTGTCACTGTTTGATCTCAAACATATATCTATTGAGGTTGGAGCTCCGTTGGTGACAAATGAGGTTGTTGGTGGAGTTTGGGTGTGTATTTATGATTCTATTTGCCCTTGTGTTATCTGGTATTGTTAAGGCAGAGGTTTACATAGTAACCGTTGAAGGTGAGCCTATCATAAGTTACACTGGCGGTATTGATGGGTTTGAAGCCACTGCTGTGGAATCTGAGGAAAAGATTGATACCACAAGTGAGTCAGTCATTTCTTATGCTCGCCACCTTGAGAAGAGACATGATATGCTTCTGGGGATGCTGTTTGACCATGGGACATACGAGAAACTCTATAGCTATCGACATCTNATAAATGGGTTTGCTGTTCACCTTTCCCCAGAACAGGTGGAAACTCTTAGACATGCTCCTGGTGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAGACTTACAACACATACCCCGCAGTTTTTGGGGCTTCCAACTGGTGTATGGCCAACAGGAGGCGGCTATGATAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATCTTTCCTCGCCACCCGAGCTTTGCAACTCATAATACTGATCCATATGGGCCAGTTCCAAAATATAGAGGAAAATGTGAAGTTGATCCTGGCACCAAAAGAAGTTTCTGTAATGGGAAGATTATTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTAATTTTGCGTCTCCTTTGGATGGAGATGGCCATGGAAGTCATACAGCCTCTATTGCAGCCGGAAGAAATGGAATTCCTGTGAGGATGCATGGTCATGAATTTGGGAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCACTTGATCAGGCTGTACATGATGGGGTGGATATACTCAGCCTTTCAGTTGGACCAAACAGTCCACCAGCAACCACCAAAACAACGTTTTTGAATCCTTTTGATGCTACACTTCTTGGGGCCGTGAAAGCGGGTGTATTTGTTGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCAAAGACATTAGTTTCATATAGTCCGTGGATAGTATCTGTCGCGGCTGCAATTGATGATCGTAGATATAAAAACCATCTGACCCTTGGAAATGGAAAAGTCTTAGCAGGAATTGGTTTGTCACCNTCTACCCGTTTAAACCAAACATACAAATTGGTTGCTGCAAACGATGTGCTGCTAGATTCTTCAGTTATGAAATACAGCCCCACGGATTGCCAGAGACCAGAACTTTTAAACAAGAACTTGATAAAGGGGAATATTCTTCTCTGTGGCTATTCTTTCAACTTTGTTGTTGGTACTGCATCAATAAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGAGCAGTTGGATTTGTTCTGTGTGTAGAAAATGTTTCTCCTGGAACGAAATTTGATCCAGTCCCTGTTGGCATTCCTGGGATTCTTATTACAGATGTCAGAAACTCGAAGAATCTGATAGATTATTATAATATCTCCACAANAAGAGACTGGACTGGAAGGGTGAAAAGTTTCAGCGGTACAGGTAAAATTGGGGATGGTTTGATGCCTATTCTCTATAAATCTGCACCACAGGTGGCATTATTCTCTGCCAGAGGGCCAAATATAAGGGACTTCAGCTTCCAAGATGCCGATCTTCTCAAACCAGATATATTAGCTCCGGGTTCATTGATTTGGGCTGCTTGGTCTCTAAATGGAACCGATGAGCCTAATTATGACGGAGAGGGATTTGCAATGATATCCGGAACTAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACATTGGAGCCCTGCTGCTATTAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGAAGTCCTATTCTAGCACAGCAATATTCTGAAACAGAAGCTGTGAAGCTGGTCAGAGCCACTCCTTTTGATTATGGGAGTGGACACGTGAATCCAAGAGCTGCCTTGGACCCTGGGCTCATCTTTGATGCTGGATACGAGGATTATTTAGGGTTCTTGTGCACAACACCTGGCATTAATATTCGTGAGATAAGGAGATACACAAACTCGCCTTGTAACAATACCATAGGNCACCCATCAAACTTAAACTCTCCATCGATTACAGTTTCCCATCTTGTGGGGACTCAAATTGTGACCCGCACAGTCACAAATGTTGCTGGGGAATTAGAAACCTACGTGATCACAGCCAGAATGCAACCATCAATTGCCATTGAAGTCAACCCTCCAGCAATGACCCTCAAAGCAGGTGCATCCCGTAAGTTTTCTGTGACACTCACTGTTCGCTCAGTGACAGGAACNTATAGTTTTGGAGAGGTTTTAATGAAGGGAAGCAGAGGGCACAAGGTGAGGGTCCCTGTTCTGGCCAATGGATACCCAAGAAGATAGCTTAAGTTTGGTCAGAAAAGAACAAGCCATGCTTGTAATATTATTCTTTGTAACTCGTGGGAATAAGAGCAGTGTGTCACGCAAAAGCAACTGTTGTGTGGAACTATTAGTTCCGCACGGTTTAGATCAAACGCGGAACTAATAGTTCCGTCTCGTTGGCCAACACCGAAAAAAACACAGCACCACGATGACGATGCGATCGTGGAATGATACCAACATGGCAGTGGCGTGCAATGGCAAAGGAAAGCGGCGGCGCTTGCATCCGGGCTTGGTACTGCAGTAGCAATGATGGCATTTGGGCTGACGGTGCAGGAGTGATGACGGTGATGAGCGATGGAGAGAGAGCTTGAGAGAGAAATTTCAATGTGTGTGTGTGTGCAAAGTGAGGGATGTATGCGGAAGTGTGCAGACAGTGAGGATTTCTGGGGGTTTTGTAAACCAAAGGGGTATTTTGGTTTTTTTCATTTTAGTGTATGTGTGAGATGAAATTTAGGTATGTGTAATTAGAAAATCTCCTCTAAAAATCAAAGACCATTTATTTGTGAGTATTTTCAGTCCAGTCCGTATAAACC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00716	15959	26485	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

cellular_component

GO:0005618 cell wall

GO:0016020 membrane

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000716s00026188.1	PF05922.11	Inhibitor_I9	27	130	2.00E-19
Glyur000716s00026188.1	PF00082.17	Peptidase_S8	161	676	3.70E-41
Glyur000716s00026188.1	PF02225.17	PA	399	508	1.60E-08
Glyur000716s00026188.1	PF06280.7	DUF1034	719	814	2.20E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	189.482
SRR1783600	control	190.444
SRR1783602	moderate drought stress	138.386
SRR1811619	moderate drought stress	138.053

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	118.050
DRR006520	Root Summer glycyrrhizin high producing strain	116.880
DRR006521	Root Winter glycyrrhizin high producing strain	4.664
DRR006522	Root Winter glycyrrhizin high producing strain	4.419
DRR006523	Root Summer glycyrrhizin low producing strain	79.193
DRR006524	Root Summer glycyrrhizin low producing strain	79.068
DRR006525	Leaf Summer glycyrrhizin high producing strain	31.619
DRR006526	Leaf Summer glycyrrhizin high producing strain	31.456

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	70.816
SRR2868004	Drought Stress (root)	50.679
SRR2967015	Control (root)	55.649

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	15.623
SRR9715740	Leaf	21.970
SRR9715741	Leaf	12.367
SRR9715739	Root	99.385
SRR9715742	Root	101.755
SRR9715743	Root	100.532

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.906
SRR8749028	MeJA induced 9h	16.399
SRR8749029	MeJA induced 9h	13.397
SRR8749030	Uninduced	3.632
SRR8749031	Uninduced	1.094
SRR8749032	Uninduced	2.676

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	324.079
SRR8400027	Control - Root	428.874