Gene detail information of Glyur000716s00026186 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17970.1 | 6.00E-18 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| NR | XP_007161116.1 | 8.00E-50 | hypothetical protein PHAVU_001G044000g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7CUZ8|V7CUZ8_PHAVU | 3.00E-50 | Uncharacterized protein {ECO:0000313|EMBL:ESW33110.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00716 | 5276 | 6529 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.058 |
| SRR1783600 | control | 13.205 |
| SRR1783602 | moderate drought stress | 14.948 |
| SRR1811619 | moderate drought stress | 15.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.474 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.356 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.929 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.091 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.650 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.883 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.681 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.202 |
| SRR2868004 | Drought Stress (root) | 1.110 |
| SRR2967015 | Control (root) | 4.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.463 |
| SRR9715740 | Leaf | 1.144 |
| SRR9715741 | Leaf | 0.261 |
| SRR9715739 | Root | 2.033 |
| SRR9715742 | Root | 0.793 |
| SRR9715743 | Root | 2.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.782 |
| SRR8749028 | MeJA induced 9h | 1.582 |
| SRR8749029 | MeJA induced 9h | 0.731 |
| SRR8749030 | Uninduced | 0.064 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.917 |
| SRR8400027 | Control - Root | 2.762 |