Gene detail information of Glyur000714s00022861 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14870.1 | 3.00E-29 | PLANT CADMIUM RESISTANCE 2 |
| NR | XP_006582840.1 | 1.20E-52 | PREDICTED: uncharacterized protein LOC100306397 isoform X1 [Glycine max] |
| Swissprot | tr|Q9LQU4|PCR2_ARATH | 2.00E-39 | Protein PLANT CADMIUM RESISTANCE 2 |
| trEMBL | tr|I1KL84|I1KL84_SOYBN | 4.00E-53 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G30410.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00714 | 56754 | 57810 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000714s00022861.1 | PF04749.12 | PLAC8 | 6 | 105 | 1.50E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.050 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.247 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.250 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.172 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.438 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.276 |
| SRR2868004 | Drought Stress (root) | 0.264 |
| SRR2967015 | Control (root) | 0.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.087 |
| SRR9715740 | Leaf | 0.851 |
| SRR9715741 | Leaf | 0.929 |
| SRR9715739 | Root | 0.215 |
| SRR9715742 | Root | 0.793 |
| SRR9715743 | Root | 0.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.799 |
| SRR8749028 | MeJA induced 9h | 5.940 |
| SRR8749029 | MeJA induced 9h | 9.462 |
| SRR8749030 | Uninduced | 28.587 |
| SRR8749031 | Uninduced | 14.154 |
| SRR8749032 | Uninduced | 28.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.485 |
| SRR8400027 | Control - Root | 0.265 |