Gene detail information of Glyur000712s00032629 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48320.1 | 8.00E-37 | Thioesterase superfamily protein |
| NR | AFK39285.1 | 8.04E-58 | unknown [Lotus japonicus] |
| COG | YP_003685008.1 | 1.00E-10 | thioesterase superfamily protein [Meiothermus silvanus DSM 9946] |
| trEMBL | tr|I3SG93|I3SG93_LOTJA | 3.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:AFK39285.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00712 | 34571 | 37566 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000712s00032629.1 | PF03061.17 | 4HBT | 67 | 123 | 2.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.845 |
| SRR1783600 | control | 6.194 |
| SRR1783602 | moderate drought stress | 3.466 |
| SRR1811619 | moderate drought stress | 3.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.520 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.022 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.839 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.947 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.177 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.017 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.300 |
| SRR2868004 | Drought Stress (root) | 3.636 |
| SRR2967015 | Control (root) | 4.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.845 |
| SRR9715740 | Leaf | 3.119 |
| SRR9715741 | Leaf | 4.251 |
| SRR9715739 | Root | 0.409 |
| SRR9715742 | Root | 0.192 |
| SRR9715743 | Root | 0.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.468 |
| SRR8749028 | MeJA induced 9h | 0.461 |
| SRR8749029 | MeJA induced 9h | 0.943 |
| SRR8749030 | Uninduced | 2.298 |
| SRR8749031 | Uninduced | 0.120 |
| SRR8749032 | Uninduced | 4.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.463 |
| SRR8400027 | Control - Root | 0.244 |