Gene detail information of Glyur000712s00032625 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38180.1 | 2.00E-06 | FAR1-related sequence 5 |
| NR | KEH42590.1 | 1.06E-35 | FAR1 DNA-binding domain protein [Medicago truncatula] |
| trEMBL | tr|A0A072VWW8|A0A072VWW8_MEDTR | 4.00E-36 | FAR1 DNA-binding domain protein {ECO:0000313|EMBL:KEH42590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00712 | 8005 | 11012 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000712s00032625.1 | PF10551.4 | MULE | 213 | 261 | 3.30E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.638 |
| SRR1783600 | control | 1.606 |
| SRR1783602 | moderate drought stress | 1.021 |
| SRR1811619 | moderate drought stress | 1.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.882 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.454 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.783 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.728 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.767 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.261 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.625 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.103 |
| SRR2868004 | Drought Stress (root) | 0.261 |
| SRR2967015 | Control (root) | 0.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.042 |
| SRR9715740 | Leaf | 0.015 |
| SRR9715741 | Leaf | 0.394 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.055 |
| SRR9715743 | Root | 0.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.606 |
| SRR8749028 | MeJA induced 9h | 3.577 |
| SRR8749029 | MeJA induced 9h | 4.838 |
| SRR8749030 | Uninduced | 0.819 |
| SRR8749031 | Uninduced | 0.886 |
| SRR8749032 | Uninduced | 0.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.188 |
| SRR8400027 | Control - Root | 1.563 |