Gene detail

Gene detail information of Glyur000711s00037595

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G54280.2	myosin 2
NR	XP_004510018.1	PREDICTED: unconventional myosin-Va-like [Cicer arietinum]
Swissprot	tr\|F4K0A6\|MYO2_ARATH	Myosin-2
trEMBL	tr\|A0A072TQA3\|A0A072TQA3_MEDTR	P-loop nucleoside triphosphate hydrolase superfamily protein {ECO:0000313\|EMBL:KEH19592.1}

Sequence

Transcript Sequence

>Glyur000711s00037595.1
CCCTCCTTCTTTTTCTGTGTGTCTGAGGAGCTTCGTTTCTTCCCAAACACAACACAACACAACCACCTTATTACCTCAATAACATCTCTTATTCTTCTTCTTCTCACTCTTGCAACCAACCTTATAACTCACACGCTTTCAGTAATGGAAACCTTCAACTCTTCGATTTCTCAACCACCATTGATTCATGCAACAAGAGAAACGAATTTTCACTCCACCCTTCAAGCTCCCATCGCTTTCAAAACTTNGTTTTTTTAAAATTCTACCAGTTTCGAACCATAAATCTCAAAAGGGTGTCTTCAATTTCGCTGCTTTTGGCAATGTGGAGGTGAAACTCAAAGTGGGGGTGGTGAATTCCAAATCGGGCATGCGAATTTGAGGGTGGAGAAAGAAAAAGAAAAATCAAGTTGCGAAACTTTCTGTGTTTTGTTTTTGTCGTCGTCGTTATGGTTGCTGCTGTTTTTGATTTCTGAATTGACCAACGAAAAGACACAGATTCTGTGATCCTTTGGTAGAGATGATGTTATCAGCTTCGCCATGTTCGCTGGCGANAAGCTCGCTGGAGGAGATGCTGGATTCGCTTCGCCGGAGGGACGAAGAGGAAAAGGAGAAGAAGGACTCGCCGCCGGCATTGCCATCCAGGCCTGCATCGCGGGCACGGCTCCCTCCGGCACGGCGGTCGCTGCCGAATAATTTCAAGGATTTCAAGGTCNGCGGCCTAGTAGGCAGCAGCGGCGCGGTGGTGGAGAATGGATTTGTTGAGAATGTGAATGGAGAGAGTAAGAGGAAGGAAACAAGTTTTGAGTACAAGAGAAGAGGAAGCAGTTTTGGTAGGAAGAGGATGAAGAAGGATGTGGAGTCCCCTTACTTTGCAGCACTTTCAGCATCAGGGATGGTTTCAGAATTGGAGGGTGACACCATTTCCTATTTCATCAAAATGAAGCTTCGTGTTTGGTGTAAGCAACCAAGAGGGCAATGGGAGCTAGNATTAATACAGTCAACTTTGGAAGATGAAGCGTCTGTTTCACTCTCGAGTGGAAATGTTGTGAAAGTGGCTACATCAGAGCTCCTACCGGCTAATCCTGATATCTTAGAGGGCGTGGATGATCTTATTAAACTCGGTTATTTGAATGAGCCATCGGTTCTTCACAATCTTCGGTTTAGATATTCTCGGGAGATGATTTATAGTAAGGCAGGGCCTGTTTTAATTGCTCTCAATCCTTTCAAAGAACTCCAGATTTATGGAAATGATTTTGTCTCCGCTTATAGGCAGAAAGTTATTGATAGTCCTCATGTTTATGCTATGGTAGATGCAGCTTATAACAAGATGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACGGAGACAGCTAAAATTGCTATGCAATACTTAGCTGCTCTTGNTGGTGGCAGTTGTGGGATAGAAAATAAAGTTCTTCGGACAAATTGTATACTGGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGAAAGTTGATTGAGATTCATTTCAGTGCCATGGGTAAAATACGCGGGGCTAAAATTCAAACCTGTAAGCTTTCAAGAGTTGTTCAACTGCCCAGTNGTGAGAGATCGTATCACATATTTTATCAACTTTGTGCTGGATCATCATCTAGTCTTAAAGAGAGACTGAATCTTAGAGTAGCCAGTGAATATAAATATCTGAATCAGAATGACTGCATGACAATTGACGGTGTTGATGATGCTAAAAACTTCCATCAGCTGATGGAAGCGTTTGATACTGTTCATATTAGTAAGGAGGGTCAAGAGCTGATCTTTAAGATGCTTGCTGCAATACTATGGCTGGGAAATATATCATTCAAANTTACAGACAGTGAAAATCACATTGAGGTTGTGGATGATGAAGCTGTAACCAGTTCTGCCTTGCTGATGGGTTGCAGTTCCCAGCAATTAATGGAAGCATTATCTACCCATAAAATCCAATCTGACGAGGATAATGTTGCCAAAAGTTTGACNTTGTTGCAGGCAATCGAATCAAGAGATGCAATTGCAAAATTCATCTATTCAAGCTTGTTTGAATGGCTTGTGGAACAAGTTAACAAGTCACTTGAAGTGGGTAAAAAGCATACAGAGAAATCCATAAGTATCCTTGATATTTATGGGTTCCAGTCATTCCAGAAGAACAGCTTTGAACAGTTTTGTATAAATTATGCCAACGAGAGGCTTCAACAACATATTAATCGGCATTTGTTTAAACTTGAGCAGGAGGACTACGAACCGGATGGCATAGATTGGACTATATTAGACATTGAGGACAATCAAGATTGCTTGGATCTATTTGAGAAGAAACCTCTCGGTCTACTCTCATTGCTGGATGAGGAATCAAATTTCCCCGAGGCTTCTGATTTAACATTTTTCAACAAACTTAAGAATCACCTAGATGCTAATCCTTGCTTCAAAGGGGAAAGAGGCAGCGCTTTCAGTGTTCGTCACTATGCAGGGGAGTTGTACTCCAAAATGTTTAACCGATCTCAAAAGCAAGAAAATTCTTCCTTCCACATTGGTTTGCTGGANTCACAGAAGCAGGGTGTTGGAACAAAGTTCAAGGATCAATTGTTCAAGTTGATGGATCAGTTGGAGAGCACCAAACCTCACTTTATTCACTGCATAAAGCCAAATACTAAGAAGCTTCCTGGAATTTATGACGACGACCTTGTCCTACAACAGCTCAGGAGTTGTGGGGTTCTAGAAGTTGTTAGAATTTCAAGGGCTGGATATCCTATTCGAATGACCCATCAAGAGTTTTCCAGAAGGTATGGGTGTCTGCTTTCTGAGNCCAATGTATCTCAGGATCCACTGAGCATCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGGTACACCAAACTGTATCTTCGAGCAGGGCAGATTGGTGCACTGGAGGATAAGAGAAAACAGGTTTTGCAGGGAATACTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCCCGCATTATTCGTGGAGAAATTTCGAGAAGGAAACATGGTGTTATGATGAAATCTTCTATAACAATTTATTCTAAAAAGCTTGAGGAGATCAATGCAATCATACTACTACAATCTGCAGCAATCCGTGGGTGGCTGGNTCGAAGGGACTATAGTCACAACAATAAGTTCAGGAAATATCATGAAAATGCAAAACCTAGACGAAAGTCTTGGGTTAAAATGCCAGAAGTGAAGGATTTGTCCAAAGAGCTGGTTCAGAATCTGCCTTTAGCTTTAGCAGAACTCCAAAAGCAGGTTTACGAGGCTGAAGCAATTGCGGAGCAAAAGGAAGAGGAAAATACTGAATTGAGGGAACAGCTAAAACAATCTGAGAAAAAGAGGATTGAATATGAGGCAAAGATGAGATCAATGGAGGAGGAGTGGCAAAAGCAGAAGGCTTCCTTGCATATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCACTGTTCAACCTGTAAGACATGACCTAGTGTCGCATCGCTACTACGATTCCACAGATGCTACTTCCATGGGATCTCAAACAACTGGTGCGAGCACACCTATAAAGTTTTCTAGTAGTTTTTCTGTCTCTGATGCAGGGAGGCAGGCAAATGGTACCTTGACTACAGTCAGCAATCTGATGAAGGAATTCGAGCAGCGAAAACAGACTTTTGATGATGAAGTGAAAGCTCTGAATGACATTAAACCGGGGCAGTCTGCCAACATGAATTCCATCGAAGAACTTCGGAAACTCAAACAAGCATTTGAGGGATGGAAGAAACAATACAAGGTTAGATTACGGGAGACAAAATCAAGGCTTCAAAAATCCGAAACTGATAAAACTCGGCGGCCATGGTGGGGGAANTTCAGCTCAAGAGTATCATAGCATCCAGTTTTCGAACACTCTCTTTGCTGGAAGTTCAGAAATGTTGAAGATTCAGCAAAAATGGCAAAATGATTGTTGTCATAAACTGTCCTTCTGAGGAGTTTCTTCTTTCATATCTTGTTTTCTTGCTTGAACACTTGATAAAAGTGTTACTGTTGTGCTACTTGGTGAAGGGAAGGAAATTGTATATCTACCAAATTTTGTTACATGGTGGGAGTATTATAGGTTGTGCAGAGTTGTGACTTGTAGGATCGCATGCTTGTATTGATTAGTCTAGTTTGCTTATGTATATTNTTTTTTCCCTTTATTTGGTTGAAAATCAGTAATGGCTCATGTATATTGTTGCTTGCCTCTTAACATATTAATTGTTGGGGTCTTCAATGTAAGGGAAAAAATATTTTCTAGCTGTATTGTTATGTCT

Protein Sequence

>Glyur000711s00037595.1
MMLSASPCSLAXSSLEEMLDSLRRRDEEEKEKKDSPPALPSRPASRARLPPARRSLPNNFKDFKVXGLVGSSGAVVENGFVENVNGESKRKETSFEYKRRGSSFGRKRMKKDVESPYFAALSASGMVSELEGDTISYFIKMKLRVWCKQPRGQWELXLIQSTLEDEASVSLSSGNVVKVATSELLPANPDILEGVDDLIKLGYLNEPSVLHNLRFRYSREMIYSKAGPVLIALNPFKELQIYGNDFVSAYRQKVIDSPHVYAMVDAAYNKMIRDEVNQSIIISGESGSGKTETAKIAMQYLAALXGGSCGIENKVLRTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSAMGKIRGAKIQTCKLSRVVQLPSXERSYHIFYQLCAGSSSSLKERLNLRVASEYKYLNQNDCMTIDGVDDAKNFHQLMEAFDTVHISKEGQELIFKMLAAILWLGNISFKXTDSENHIEVVDDEAVTSSALLMGCSSQQLMEALSTHKIQSDEDNVAKSLTLLQAIESRDAIAKFIYSSLFEWLVEQVNKSLEVGKKHTEKSISILDIYGFQSFQKNSFEQFCINYANERLQQHINRHLFKLEQEDYEPDGIDWTILDIEDNQDCLDLFEKKPLGLLSLLDEESNFPEASDLTFFNKLKNHLDANPCFKGERGSAFSVRHYAGELYSKMFNRSQKQENSSFHIGLLXSQKQGVGTKFKDQLFKLMDQLESTKPHFIHCIKPNTKKLPGIYDDDLVLQQLRSCGVLEVVRISRAGYPIRMTHQEFSRRYGCLLSEXNVSQDPLSISVAVLQKFNIPSEMYQVGYTKLYLRAGQIGALEDKRKQVLQGILGIQKCFRGHQARIIRGEISRRKHGVMMKSSITIYSKKLEEINAIILLQSAAIRGWLXRRDYSHNNKFRKYHENAKPRRKSWVKMPEVKDLSKELVQNLPLALAELQKQVYEAEAIAEQKEEENTELREQLKQSEKKRIEYEAKMRSMEEEWQKQKASLHMSLVAARKSLASENATVQPVRHDLVSHRYYDSTDATSMGSQTTGASTPIKFSSSFSVSDAGRQANGTLTTVSNLMKEFEQRKQTFDDEVKALNDIKPGQSANMNSIEELRKLKQAFEGWKKQYKVRLRETKSRLQKSETDKTRRPWWGXFSSRVS

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00711	53929	67151	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016459 myosin complex

molecular_function

GO:0003774 motor activity

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000711s00037595.1	PF00063.16	Myosin_head	195	673	6.70E-167
Glyur000711s00037595.1	PF00063.16	Myosin_head	678	817	1.10E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.290
SRR1783600	control	4.245
SRR1783602	moderate drought stress	3.740
SRR1811619	moderate drought stress	3.724

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.564
DRR006520	Root Summer glycyrrhizin high producing strain	8.390
DRR006521	Root Winter glycyrrhizin high producing strain	0.596
DRR006522	Root Winter glycyrrhizin high producing strain	0.566
DRR006523	Root Summer glycyrrhizin low producing strain	5.239
DRR006524	Root Summer glycyrrhizin low producing strain	5.235
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.031
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.930

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.917
SRR2868004	Drought Stress (root)	19.769
SRR2967015	Control (root)	23.120

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	26.313
SRR9715740	Leaf	21.721
SRR9715741	Leaf	25.514
SRR9715739	Root	0.358
SRR9715742	Root	4.727
SRR9715743	Root	4.702

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.551
SRR8749028	MeJA induced 9h	5.260
SRR8749029	MeJA induced 9h	1.299
SRR8749030	Uninduced	1.878
SRR8749031	Uninduced	0.639
SRR8749032	Uninduced	0.427

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	20.202
SRR8400027	Control - Root	25.254