Gene detail

Gene detail information of Glyur000710s00027835

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G80920.1	7.00E-40	Chaperone DnaJ-domain superfamily protein
NR	XP_004507050.1	1.17E-85	PREDICTED: chaperone protein dnaJ 8, chloroplastic-like [Cicer arietinum]
COG	YP_001356422.1	8.00E-11	co-chaperone-curved DNA binding protein A [Nitratiruptor sp. SB155-2]
Swissprot	tr\|Q9SAG8\|DNAJ8_ARATH	4.00E-50	Chaperone protein dnaJ 8, chloroplastic (Precursor)
trEMBL	tr\|I3S8L3\|I3S8L3_LOTJA	9.00E-85	Uncharacterized protein {ECO:0000313\|EMBL:AFK36605.1}

Sequence

Transcript Sequence

>Glyur000710s00027835.1
ATTGAGCTAAAAAATTTCAAAGAAAAGAAAACTAACACACTATTTTAGGGTTCGGACAGATTCCCCATCTAAATCAATCAACTTGCGCCGTGCCCATTTGATCCATTCTAAACAAAATCTAAAAAATCGAAAGAAAAAAGATCAAAGTTTGGTTATTTATAGCCAAAGCTTTTCTGGGTCATTGTGAGTTTGTGTTATTAGATATTTATTTTCTATCTGGTTTTTGGGAGATTCAAATCATCAAATCAAGAGGTTGTTGCTTGTTGCAATTATGGCTGCTGCAGCTGCTGCTGGGGTTGTTGGTGGGAATGGGTCATCCCCTTCTTGGATGCAATTCAGAAGCAGGGAAAAGAATAAGCAGATCAATAAGGTGAACAGGGCTAGGATCTGTTGCTCTTCTTCTTCTTCTGCTGCTGTTATGGATCCTTATAAGACCTTGAGGATAACACCAGGTGCCTCTGAATCTGAGGTCAGGAAGGCTTTCAGACGCCTTGCTTTGCAGTACCATCCAGACGTGTGCAGAGGGAGAGATTGTGGTGTTCAGTTTCACCAAATCAACGAGGCTTATGATATTGTGATGGCTAATTTGAGAGGAGAATCAAATGCAGCAGAAACATATGAGGCATATGATGATGCAGGCATTGATGAGCCATTCAGGGGAATGAATGATCCAGATTGGGACTATTGGGAAGAGTGGATGGGTTGGGAAGGAGCAGGAATTCGTGACTACTCCTCTCATATTAATCCTTACATTTGAAAAATAAAAGTTTATATAATGTAATTTTATCAATTATTAGGCTTTTAATCATACTTGTTCATTATTAGTTAAAATGGGTCTGTCTAATTAGACCTACTTTTGTCCCCCACCCAAAGGGGTTGGTGTTGTTTGTATATAGTCCACAAGTGAATGTAAAGCCTCTCTCTGCATAATTGAAGTTGAGGAAGTGGCTTGTTATTGTTGAATACAATGAAAAGCATCCACCTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00710	112941	114694	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000710s00027835.1	PF00226.26	DnaJ	51	103	3.00E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.938
SRR1783600	control	8.202
SRR1783602	moderate drought stress	9.567
SRR1811619	moderate drought stress	9.672

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.241
DRR006520	Root Summer glycyrrhizin high producing strain	9.403
DRR006521	Root Winter glycyrrhizin high producing strain	2.567
DRR006522	Root Winter glycyrrhizin high producing strain	1.950
DRR006523	Root Summer glycyrrhizin low producing strain	2.615
DRR006524	Root Summer glycyrrhizin low producing strain	2.503
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.172
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.544

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.956
SRR2868004	Drought Stress (root)	49.770
SRR2967015	Control (root)	60.523

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	42.801
SRR9715740	Leaf	15.579
SRR9715741	Leaf	53.573
SRR9715739	Root	3.230
SRR9715742	Root	9.189
SRR9715743	Root	7.902

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.394
SRR8749028	MeJA induced 9h	19.569
SRR8749029	MeJA induced 9h	0.616
SRR8749030	Uninduced	0.285
SRR8749031	Uninduced	21.268
SRR8749032	Uninduced	16.809

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	32.825
SRR8400027	Control - Root	28.959