Gene detail information of Glyur000710s00027822 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79720.1 | 5.00E-151 | Eukaryotic aspartyl protease family protein |
| NR | XP_007142110.1 | 0 | hypothetical protein PHAVU_008G253400g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LHE3|ASPG2_ARATH | 4.00E-66 | Protein ASPARTIC PROTEASE IN GUARD CELL 2 (Precursor) |
| trEMBL | tr|V7B8E4|V7B8E4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW14104.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00710 | 23785 | 25839 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000710s00027822.1 | PF14543.1 | TAXi_N | 135 | 304 | 1.50E-39 |
| Glyur000710s00027822.1 | PF14541.1 | TAXi_C | 329 | 476 | 6.00E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.244 |
| SRR1783600 | control | 14.605 |
| SRR1783602 | moderate drought stress | 6.155 |
| SRR1811619 | moderate drought stress | 6.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.815 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.776 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.855 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.943 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.539 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.758 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.113 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.336 |
| SRR2868004 | Drought Stress (root) | 9.657 |
| SRR2967015 | Control (root) | 11.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.516 |
| SRR9715740 | Leaf | 0.945 |
| SRR9715741 | Leaf | 1.084 |
| SRR9715739 | Root | 7.216 |
| SRR9715742 | Root | 9.920 |
| SRR9715743 | Root | 9.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.180 |
| SRR8749028 | MeJA induced 9h | 0.200 |
| SRR8749029 | MeJA induced 9h | 0.072 |
| SRR8749030 | Uninduced | 0.038 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.417 |
| SRR8400027 | Control - Root | 38.248 |