Gene detail

Gene detail information of Glyur000710s00027821

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G38620.2	1.00E-152	cyclin-dependent kinase B1;2
NR	XP_004507034.1	0	PREDICTED: cyclin-dependent kinase B1-2-like [Cicer arietinum]
COG	YP_753905.1	2.00E-24	serine/threonine protein kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Swissprot	tr\|Q2V419\|CKB12_ARATH	0	Cyclin-dependent kinase B1-2
trEMBL	tr\|P93321\|P93321_MEDSA	0	Cdc2MsD protein {ECO:0000313\|EMBL:CAA65980.1}

Sequence

Transcript Sequence

>Glyur000710s00027821.1
CCGTTACCCCCCTTTACGCTCCTCTCTTCAAATTCAACTATTTCTCTCATTCCTCAACGTCTCTCCCAAACAACCCCTCTCTCTCTTTTCTCTCTTCTCTTTCGAACACACACACACACACACACACACACACTGGTTCATTGTGACAATGGAGAAGTACGAGAAACTGGAGAAGGTAGGAGAAGGAACATATGGCAAAGTATACAAAGCAAAAGAGAAATCAACGGGTCAAATAGTAGCACTCAAGAAGACGCGCCTCGAGATGGACGAAGAAGGCGTGCCTCCCACCGCCCTCCGTGAAGTCTCACTCCTCCAATTACTCTCCCAATCCATCTACATCGTTCGTCTCCTCAACGTCGAACACATCGACAAAACCCCCAAAAACACCAATGGAAATGGGTCCCACACATCAAAACCCATTCTCTACCTCGTATTCGAGTACCTCGACACAGATCTAAAGAAATTCATCGATACTTTCCGTAAAGGACCAAACCCTAGGCCACTACCGATTTCACTTGTTCAGAGTTTTCTGTTTCAGCTTTGTAAGGGCGTTGCGCATTGTCATAGTCATGGTGTTCTTCACCGTGATCTTAAGCCTCAGAATCTCTTGCTTGATCAACAGAAAGGGATTCTTAAGATTGCTGACCTTGGTCTTGGACGCGCGTTCACTGTTCCGATGAAGAGTTACACGCATGAGATTGTTACGCTTTGGTATAGGGCTCCTGAGGTTTTGCTTGGTTCTACTCATTACTCTACTGGTGTTGATATTTGGTCCGTTGGGTGTATCTTTGCTGAAATGGTGAGAAGACAGGCTCTGTTTCCTGGGGATTCTGAGTTCCAGCAGCTTCTTAACATATTTAAGCTTTTGGGGACTCCAACGGAGGAACAATGGCCGGGAGTGACTTCTCTGCGTGATTGGCATTTGTACCCGCGGTGGGAGCCTCAGAACTTGTCAAGGGCTGTGCCAACATTAGGACCAGAAGGAGTGGACCTTCTCTCGAAAATGCTCAAGTATAACCCTGCTGAAAGAATATCTGCCAAAGCAGCACTTGATCATCCCTACTTTGACAGTCTTGACAAGTCTCAATTTTAATGATGACTATAGTGGAAGGTTTGGTTCAGATGTCTCTGTTAAGAAATATTATATGGCTGGCTGTCAATGAAAATTAGTTCATTGCATGAGAATTTGAAGATTTCTCAAGTTGGTGTTATGTAATATTTCGTCATCATCTTGGTGATATGAACAATTCACTCTTGGAGCAGCAGTTCATGATTACCATGTCTNTCTTGTAACACACTTGAAGAACTTTATGCACCTCTAAAGTTGTAATATCTTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00710	19973	22885	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000710s00027821.1	PF00069.20	Pkinase	4	306	5.50E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.461
SRR1783600	control	13.541
SRR1783602	moderate drought stress	7.886
SRR1811619	moderate drought stress	7.768

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.880
DRR006520	Root Summer glycyrrhizin high producing strain	12.671
DRR006521	Root Winter glycyrrhizin high producing strain	0.416
DRR006522	Root Winter glycyrrhizin high producing strain	0.487
DRR006523	Root Summer glycyrrhizin low producing strain	4.256
DRR006524	Root Summer glycyrrhizin low producing strain	4.368
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.919
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.843

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	53.438
SRR2868004	Drought Stress (root)	22.182
SRR2967015	Control (root)	28.012

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.258
SRR9715740	Leaf	0.985
SRR9715741	Leaf	1.832
SRR9715739	Root	9.569
SRR9715742	Root	7.525
SRR9715743	Root	8.606

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	33.699
SRR8749028	MeJA induced 9h	38.381
SRR8749029	MeJA induced 9h	18.653
SRR8749030	Uninduced	0.362
SRR8749031	Uninduced	0.291
SRR8749032	Uninduced	0.615

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	39.329
SRR8400027	Control - Root	30.312