Gene detail information of Glyur000705s00027461


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G19710.20aspartate kinase-homoserine dehydrogenase ii
NRXP_004502256.10PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like isoform X2 [Cicer arietinum]
COGYP_003570740.10Bifunctional aspartokinase/homoserine dehydrogenase II [Salinibacter ruber M8]
Swissprottr|P37142|AKH_DAUCA0Homoserine dehydrogenase (Precursor; Fragment)
trEMBLtr|G7JAT7|G7JAT7_MEDTR0Aspartokinase-homoserine dehydrogenase {ECO:0000313|EMBL:AES71954.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold007051197426075-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K12524thrAEC:2.7.2.4 1.1.1.3Biosynthesis of amino acidsmap01230
Glycine, serine and threonine metabolismmap00260
Cysteine and methionine metabolismmap00270
Lysine biosynthesismap00300
Monobactam biosynthesismap00261


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process

GO:0008152  metabolic process

GO:0008652  cellular amino acid biosynthetic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004072  aspartate kinase activity

GO:0016491  oxidoreductase activity

GO:0016597  amino acid binding

GO:0050661  NADP binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000705s00027461.1PF00696.23AA_kinase863464.70E-35
Glyur000705s00027461.1PF01842.20ACT3924471.40E-08
Glyur000705s00027461.1PF01842.20ACT4745232.20E-09
Glyur000705s00027461.1PF03447.11NAD_binding_35296442.20E-22
Glyur000705s00027461.1PF00742.14Homoserine_dh6528501.30E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.127
SRR1783600control7.178
SRR1783602moderate drought stress7.959
SRR1811619moderate drought stress7.832

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.624
DRR006520Root Summer glycyrrhizin high producing strain0.674
DRR006521Root Winter glycyrrhizin high producing strain0.970
DRR006522Root Winter glycyrrhizin high producing strain1.134
DRR006523Root Summer glycyrrhizin low producing strain0.196
DRR006524Root Summer glycyrrhizin low producing strain0.171
DRR006525Leaf Summer glycyrrhizin high producing strain31.177
DRR006526Leaf Summer glycyrrhizin high producing strain30.425

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)50.437
SRR2868004Drought Stress (root)140.293
SRR2967015Control (root)89.093

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf19.710
SRR9715740Leaf8.558
SRR9715741Leaf12.219
SRR9715739Root4.943
SRR9715742Root45.087
SRR9715743Root36.461

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.091
SRR8749028MeJA induced 9h0.086
SRR8749029MeJA induced 9h0.034
SRR8749030Uninduced0.329
SRR8749031Uninduced0.000
SRR8749032Uninduced0.041

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root154.601
SRR8400027Control - Root225.704

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved