Gene detail information of Glyur000703s00022099 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30280.1 | 1.00E-53 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_003546576.1 | 0 | PREDICTED: uncharacterized protein LOC100801416 isoform X1 [Glycine max] |
| Swissprot | tr|Q0WQ57|AUXI2_ARATH | 6.00E-30 | Auxilin-related protein 2 |
| trEMBL | tr|I1MHW5|I1MHW5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G23470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00703 | 59928 | 63331 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.360 |
| SRR1783600 | control | 4.435 |
| SRR1783602 | moderate drought stress | 10.387 |
| SRR1811619 | moderate drought stress | 10.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.730 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.255 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.520 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.510 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.747 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.447 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.941 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.762 |
| SRR2868004 | Drought Stress (root) | 35.828 |
| SRR2967015 | Control (root) | 82.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.557 |
| SRR9715740 | Leaf | 6.853 |
| SRR9715741 | Leaf | 7.236 |
| SRR9715739 | Root | 1.255 |
| SRR9715742 | Root | 7.079 |
| SRR9715743 | Root | 5.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.048 |
| SRR8749028 | MeJA induced 9h | 2.394 |
| SRR8749029 | MeJA induced 9h | 1.841 |
| SRR8749030 | Uninduced | 0.963 |
| SRR8749031 | Uninduced | 2.617 |
| SRR8749032 | Uninduced | 3.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.194 |
| SRR8400027 | Control - Root | 31.012 |