Gene detail

Gene detail information of Glyur000703s00022096.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G30270.1	0	CBL-interacting protein kinase 23
NR	XP_010052037.1	0	PREDICTED: CBL-interacting serine/threonine-protein kinase 23 [Eucalyptus grandis]
COG	YP_002432751.1	2.00E-36	serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01]
Swissprot	tr\|Q93VD3\|CIPKN_ARATH	0	CBL-interacting serine/threonine-protein kinase 23
trEMBL	tr\|A0A059CCJ4\|A0A059CCJ4_EUCGR	0	Uncharacterized protein {ECO:0000313\|EMBL:KCW75891.1}

Sequence

Transcript Sequence

>Glyur000703s00022096.1
TTTCCCCCTGAAGGGGAAAAAAAAAAACAAGACAAGAAAATCCATTTTTTGGGTCCGTTTGATGGGGTTCTCCTCCTATTCAACCGTCATGTTATTNTTCGTCATCATCAGCTACAAAGCCTGAGTGTTGGCCGTTGTTATAATTGGAGGTTGTTTATTTTCCTTGGATATAGAAATTAAGAAAAAATGAGGTTGGGCAAGTCTCAGGTGTGGCAGCCATGCAAGAAGAAGAGGTCCTGATATATATACAAGTACCTCTGGTGGTGGCAGGCATGGTGAGGCTCTAGCTAGAGAGAGAAAGTCAAGGAGTTTAGAGAGAAGTGAAGAAGATGACGTCACGTTGGGGGCATGGTGGTGGTGGCAGCAGCAAGAGCACGAGCAGCACACGTGTCCGTGTGGGAAAATATGAAGTGGGTCGGACCCTTGGTGAGGGGAACTTCGCCAAGGTGAAGTTTGCTCGGAACACTGAGACCGGAGAGAATGTGGCCATCAAAATTCTGGACANAGACAAAGTTCTCAAGCACCAAATAATAGGCCAGATAAAACGAGAAATATCAACAATGAAACTCATTAGACACCCGAATGTCATACGTATGTACGAGGTGATGGCTAGCAAGACAAAGATATACATTGTATTGGAACTTGTGACTGGTGGGGAACTGTATGATAAAATTGCAAACCACGGGAGACTGAAAGAAGATGAAGCAAGAAAGTATTTTCAGCATCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTCTTCCATAGAGACTTAAAGCCGGAGAATTTGTTGCTGGATGCTGATGGAGTGCTTAAAGTATCTGATTTTGGATTGAGTGCACTACCTCAACAAGTTCGAGAAGATGGGCTACTTCACACATCATGTGGTACGCCAAACTATGTTGCCCCTGAGGTCATTCACGGCAAAGGCTATGATGGTGCAAAGGCTGATCTCTGGTCATGTGGTGTTATTCTGTTTGTTTTGATGGCTGGCTATTTGCCCTTCGAAGATGACAACCTTATGACTTTATATAAAAAGATTTTCAAGGCTGACTTCACTTGTCCTTCATGGTTTTCAACAAGTGCAAAGAGACTAATCAAGAGAATCCTTGATCCCAATCCTGCTACACGGATTACAATTGCTGAGGTCCTTGAGAATAAGTGGTTCAAAATCGGGTATATGCCTCCTCGATTTTCGGAGGCTAATGTTAGTCTTGATGATGTAAATGCTATTTTCAGTGAAGCAGCTGATTCAGAAAATCTTGTTGTGGAGAGGCGAGAAGAGGGGCCTGTATCACCTGTGACTATGAATGCGTTTGATCTCATCTTTACTTCTCAGGGCCTCAACCTTAGAAATCTTTTCGAGAAGCAGATGGGACTTGTTAAAAGGGAGACAAGATTCACATCCAAATGTTCAGCAAATGAAATAATTTCCAAAATTGAGCAGGCTGCAGTGCCTTTGGGTTTTCATGTTAAGAACAACAATTATAAGTTGAAGATTCAAGGGGAAAAAACTGGACGAAAAGGTCATCTATCAATAGTCACTGAGATCTTTGAGGTGNCCCCTTCACTTAACATGGTTGAGCTTCGGAAGTCAGGAGGAGATACTCTGGAATTTTACAAGTTTTACAAGAATCTATCTAATGGGCTGAAAGATATCATTTGGAAAGCAGAGCCTCTTGATGAAGAAACAGATGATGTCAATACATCAACATAATTTGTTTCTCAGAATCGTCGTCTCAGTGAATGTCCAAGTTTGTGTTTATGGTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00703	44289	49855	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0007165 signal transduction

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000703s00022096.1	PF00069.20	Pkinase	26	281	5.70E-74
Glyur000703s00022096.1	PF03822.9	NAF	324	384	2.10E-22

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.009
SRR1783600	control	7.029
SRR1783602	moderate drought stress	4.627
SRR1811619	moderate drought stress	4.528

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.759
DRR006520	Root Summer glycyrrhizin high producing strain	10.832
DRR006521	Root Winter glycyrrhizin high producing strain	2.800
DRR006522	Root Winter glycyrrhizin high producing strain	2.786
DRR006523	Root Summer glycyrrhizin low producing strain	4.291
DRR006524	Root Summer glycyrrhizin low producing strain	4.284
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.785
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.780

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	35.916
SRR2868004	Drought Stress (root)	73.686
SRR2967015	Control (root)	79.355

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.323
SRR9715740	Leaf	8.461
SRR9715741	Leaf	4.618
SRR9715739	Root	3.606
SRR9715742	Root	8.249
SRR9715743	Root	6.919

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.952
SRR8749028	MeJA induced 9h	21.602
SRR8749029	MeJA induced 9h	18.155
SRR8749030	Uninduced	14.317
SRR8749031	Uninduced	8.082
SRR8749032	Uninduced	6.661

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	35.695
SRR8400027	Control - Root	37.774