Gene detail information of Glyur000702s00024651 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20180.1 | 6.00E-43 | Protein of unknown function (DUF677) |
| NR | KEH20116.1 | 6.02E-86 | transmembrane protein [Medicago truncatula] |
| Swissprot | tr|Q6DYE5|U496K_ARATH | 4.00E-50 | UPF0496 protein At1g20180 |
| trEMBL | tr|A0A072TSC9|A0A072TSC9_MEDTR | 2.00E-86 | Transmembrane protein {ECO:0000313|EMBL:KEH20116.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00702 | 114064 | 115624 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.054 |
| SRR1783600 | control | 0.054 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.161 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.161 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.037 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.954 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.138 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.904 |
| SRR2868004 | Drought Stress (root) | 1.363 |
| SRR2967015 | Control (root) | 1.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.585 |
| SRR9715743 | Root | 0.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.535 |
| SRR8749028 | MeJA induced 9h | 5.384 |
| SRR8749029 | MeJA induced 9h | 2.816 |
| SRR8749030 | Uninduced | 0.665 |
| SRR8749031 | Uninduced | 15.891 |
| SRR8749032 | Uninduced | 14.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.174 |
| SRR8400027 | Control - Root | 0.643 |