Gene detail information of Glyur000701s00019661 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G22300.1 | 4.00E-26 | carboxylesterases |
| NR | ACJ84519.1 | 1.47E-38 | unknown [Medicago truncatula] |
| COG | YP_003673580.1 | 2.00E-07 | carboxylesterase [Methylotenera versatilis 301] |
| trEMBL | tr|B7FIE0|B7FIE0_MEDTR | 5.00E-39 | Putative uncharacterized protein {ECO:0000313|EMBL:ACJ84519.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00701 | 122227 | 123316 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000701s00019661.1 | PF02230.11 | Abhydrolase_2 | 5 | 62 | 4.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.835 |
| SRR1783600 | control | 15.073 |
| SRR1783602 | moderate drought stress | 24.132 |
| SRR1811619 | moderate drought stress | 18.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.494 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.385 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.533 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.871 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.484 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.725 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.415 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.341 |
| SRR2868004 | Drought Stress (root) | 17.950 |
| SRR2967015 | Control (root) | 17.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.970 |
| SRR9715740 | Leaf | 16.498 |
| SRR9715741 | Leaf | 18.118 |
| SRR9715739 | Root | 11.240 |
| SRR9715742 | Root | 9.788 |
| SRR9715743 | Root | 13.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.367 |
| SRR8749028 | MeJA induced 9h | 5.574 |
| SRR8749029 | MeJA induced 9h | 11.539 |
| SRR8749030 | Uninduced | 4.425 |
| SRR8749031 | Uninduced | 1.530 |
| SRR8749032 | Uninduced | 4.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.294 |
| SRR8400027 | Control - Root | 16.434 |