Gene detail information of Glyur000701s00019654 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17950.1 | 4.00E-24 | |
| NR | XP_007152679.1 | 4.49E-93 | hypothetical protein PHAVU_004G150000g [Phaseolus vulgaris] |
| Swissprot | tr|Q6DR24|Y3795_ARATH | 3.00E-41 | Uncharacterized protein At3g17950 |
| trEMBL | tr|V7C5Q8|V7C5Q8_PHAVU | 2.00E-93 | Uncharacterized protein {ECO:0000313|EMBL:ESW24673.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00701 | 83237 | 84568 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.344 |
| SRR1783600 | control | 6.822 |
| SRR1783602 | moderate drought stress | 3.277 |
| SRR1811619 | moderate drought stress | 3.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.212 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.443 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.133 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.758 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.886 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.900 |
| SRR2868004 | Drought Stress (root) | 4.022 |
| SRR2967015 | Control (root) | 3.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.069 |
| SRR9715740 | Leaf | 0.631 |
| SRR9715741 | Leaf | 1.272 |
| SRR9715739 | Root | 10.360 |
| SRR9715742 | Root | 5.940 |
| SRR9715743 | Root | 5.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.396 |
| SRR8749028 | MeJA induced 9h | 0.508 |
| SRR8749029 | MeJA induced 9h | 0.351 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.844 |
| SRR8400027 | Control - Root | 8.829 |