Gene detail

Gene detail information of Glyur000701s00019651

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G18270.1	0	ketose-bisphosphate aldolase class-II family protein
NR	XP_004512793.1	0	PREDICTED: uncharacterized protein LOC101509479 [Cicer arietinum]
COG	NP_865716.1	1.00E-100	hypothetical protein RB3773 [Rhodopirellula baltica SH 1]
Swissprot	tr\|Q9SUC0\|3HIDH_ARATH	9.00E-18	Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial (Precursor)
trEMBL	tr\|K7L0V1\|K7L0V1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G11615.1}

Sequence

Transcript Sequence

>Glyur000701s00019651.1
TGAACATCTATCATAAGTTGCTGTCAAAGTGTTAAGTTTTTTAATAATCATGGACATGGCCATACTTTGCACGAGTTTTATTCTAACTATTACTATTTAATTTGGATTATGGTGAGAGATAGAAGGGAAAAAAAGAGAGAGAAGGAGGGAGTAATTGGAGCAGTTGCAGCGATACAAACAAAATCACAATCAGAAAAGCATTTAGATTGGTGAAGTATTGGATCAGTGCTGGTGATTGAGATATAAGAAGATTTTCGGTTTCTGGTTTTGCAATTGGAAGTAGCAATCTGCTGCAATGGAAGGTGGGAGAGTGGTGGGGTTCGTTGGGTTGGATGAATTGGGATTAGAGATGGCCTCGTCGCTTCTTCGCCATGGCTATGCCGTCCAAGCTTTCGAGATAAGTGATCCCATCATAAATGAACTCGTCAAGTTTGGAGGAATTAGATGTGCAAGTCCTTTGGAAGCAGGGAGAGGTGTAGAAGCTTTAGTTGTCCTAATATCTCACATGGATCAAATTAATGATCTAATCTTTGGGGATGAGGGTGCTTTGAAAGGTCTAAAACCAGATACAGTTCTTATTCTTCGTTCAACCATATTACCATCATTTCTCCAGAAACTGGAAAAGGATCTGGAAGAAATTCATGAGATAGCTTATGTTGTTGATGCTTATGTCTCTTATGGGAGGTCTGATGATTTGAATGGAAAAGTCACTATTGCATCATCCGGAAGATCAGATGCCATTGCAAGAGTTCGGCCTGTTCTTTCAGCAATGTGTGACAAGCTGTTCACTTTTGAGGGTGAAATTGGTGGTGGCAGTAAAGTTAAAATGGTTTCTGTAATGCTGGAAGGTATTCATTTCATTGCTTCNGTGGAGGCTCTCTCTCTTGGTGCTAAAGCTGGAATTCATCCTTGGATAATATATGATATAATTTCCAATGCTGCTGGAAATTCGTGGGTATTCAAGAATAATGTTCCTCTTTTGTTAAAGGGAGAAGTTAAGCATCAAATTCTGAACACTTTAGTTAAGGAGTTGGAAACAATTTTGGATATTGCCAAGTCACTTACTTTTCCACTTCCACTTTTGGCTTCTACTCATCAACAACTTATTCATGGGGTTTCACATGTTTGTTATGAAGATGATGATGGTACAGCATTAATTAAGGTTAATTTCATGAACATTTATGCAGCAAATGCAGATGCATATAATGCTGAACAACTGGCATCTGAANTCATGACTGCTCCTATGAGTGGGAGAAGGGTTGGTTTTATTGGCCTTGGAGCTATGGGATTTGGCATGGCAACTCATTTGCTGAGTTCGAATTTCTGCGTTGTTGATGTTGATGTTCTCNTAATCATGGTTGCAAACGAAGCTCAAGCAGAGAATGCTTTATATGGAGAATATGGTGCTGTTTCAGCTCTTCCTCCAGGTGCATCTGTCNTCCTTTCTTCTACTGTTTCTCCAGCATATGTGAGTCAGCTAGAGCGCAGATTGCATAATGAAGGTAAGAATTTAAAGTTGGTGGATGCTCCTGTTTCTGGTGGTGTTAAGAGGGCCTCAATGGGAACACTTACGATAATGGCTTCAGGAACTGATGATGCTCTCAAGAGTGTTGGTTTAGTCTTAGCAGCCTTGAGTGAAAAACTTTATGTTATCAAAGGTGGTTGTGGTTCTGGGAGTGGTGTAAAGATGGTTAACCAGTTGCTTGCTGGAGTTCATATTGCATCAGCTGCTGAGGCAATGGCATTTGCAGCACGATTGGGTTTGAATACAAGGCTGTTGTTTGATTTTATTACAATTAGTGGGGGAACATCCTGGATGTTTGAAAATCGTGTTCCCCACATGCTTAACAATGATTACTCACCTTATTCAGCGCTTGATATCTTTGTGAAGGACCTGGGAATCGTTACTNGTGAATCATCTTCTTTGAAAGTTCCACTTCACCTATCAACTATTGCTCACCAACTGTATTTGTCAGGTGTTCTATATTACTTTAAATCTTCATATGTTTATGAGACACTTACTGGTGTTAGAGTTGAAGGAAATCTCCAGGCTCTCAGGAAAGATGTTGTGTTGCATTCTCTTCCACCGGAGTGGCCCCAAGATCATGTTCTTGACATACAAAGACTAAAAGAAAGCAATTCAAAGATTCTGGTTGTTCTGGATGATGATCCAACAGGAACACAAACTGTTCATGATATTGAGGTATTAACGGAATGGACTANTGATTCACTGATTGAGCAGTATAGAAAATGTCCAAAATGCTTTTTCATTTTGACAAACTCCAGGTCACTGGGTTCTGACAAGGCCAGTATATTGATAAAAGAGATTTGCAGAAATCTAGACACTGCAGCAAAATCAGTTGACAACATTGATTATACAGTAGTTTTGAGGGGAGATTCAACTTTGCGTGGTCATTTTCCAGAGGCAAGGATGACATGTTTTAGCCCAATAATATTGGGTGAAATGGATGCATGGATAATTTGTCCCTTTTTCCTTCAAGGAGGCCGTTACACTATTGAAGACATACATTTTGTTGCTGATTCCGAAATGCTTGTTCCTGCTGGGGACACAGAGTTTGCCAAAGATGCTTCCTTTGGCTACAAATCTTCAAATTTACGTGATTGGGTAGAGGAAAAGACAAATGGCCGCATTCTTGCAAGTAGTGTTGTATCTATTTCTATCCACCTTTTGAGGAAAGGGGGGCCAGATGCAGTTTGTCAGCATCTATGCAGTTTGCAGAAGGCAGAATTGATGGGAAAACGTTTCTTGTGTCGCACTGCTGCTAGTTTTGTTTCTGCCCGTATTGGAATCATTTCTAAGCCTCCAGTATTGCCAAAGGATGTAGGAATAGCTAGAGAAAGGAATGGAGGTTTGATAATTGTGGGATCATATGTTCCAAAAACAACAAAGCAGGTTGAAGAGCTTAAATTACAGTGTGGTCAGTTCTTAAGAAGCATTGAGGTATCCGTTGAAAAACTTGCAATGCGGCCAATTGAGGAAAGGGAGGAGGAAATCAGTAGAACAGCTGAATTAGCAGATTTATATCTTAGAGCTCATAAAGACACTCTTATAATGACCAGCCGAAATCTCATAACTGGAAAAACTGCCTCTGAGAGTTTGGACATTAACTTTAAAGTGAGTTCTGCTTTGGTGGAAATAGTGAAAAGAATAACTACAAAACCTCGCTACATAATTGCAAAGGGTGGTATTACCTCTTCAGACCTTGCTACAAAAGCCCTTGGTGCAAGATGTGCCAAGATTGTTGGACAAGCACTTGCCGGTATTCCCTTGTGGCAATTGGGCCCTGAAAGTAGACATCCTGGAGTTCCTTATATTGTCTTCCCTGGTAACGTTGGTGACAGCAAAGCATTGGCAGAAGTGGTGAAGTCCTGGACTTATCCAATCAGATTTTCGTCAACAAGAGAGATTCTTAACAATGCAGAAAAGGGTGGATATGCCGTTGGAGCATTTAATGTCTATAATTTGGAAGGAGTTGAGGCTGTTGTTTCTGCTGCAGAGGAAGAACAAAGTCCTGCTATATTACAGATCCATCCTGGCGCCTTGAAGGAAGGAGGAGTTCCCTTGGTTGCTTGTTGTATTTCTGCTGCAAAGCAAGCCAGTGTTCCTGTTACTGTTCACTTTGATCATGGAACCTCAAAGCAAGATCTTGTGGAAGCTCTTGAGCTGGGATTCAGTTCTGTAATGGTAGATGGTTCAAATCTTTCTTTCAATGAGAATGCTGCATACACAAAATTTATATCATCGTTGGCTCACTCAAAAGATATGTTGGTTGAAGCTGAGCTAGGAAGATTGTCAGGGACAGAGGATGATTTGACAGTTGAAGAGTATGAAGCCAGGCTAACAGATGTTAATATGGCAGAAAAATTCATTGATGAGACTGGCATAGATGCTTTGGCAGTGTGTATTGGTAATGTTCATGGAAAGTACCCAGCAAGTGGTCCAAATCTCAGACTTGATTTGCTCAAGGTNATATTACATTTCTGCTTTGACGAAAATTTGGACAGCTTAGAGCTGCATGCTTTGAGCCTGAAGAAAGGAGTTTTTGTGGTGCTTCATGGGGCATCTGGTTTGGGCGAAGAACTTGTTAAGGAATGTATAAATCTTGGAGTTAGAAAGTTCAATGTCAACACCGAAGTGAGGAAGGCATACATGGACTCACTGATTACTCCAAAGAAAGATCTAGTTCATGTTATGGCTTCTGCAAAGGAAGCCATGAAAGCTGTGGTTGCAGAAAAGATGCATCTCTTTGGTTCAGCAGGAAAGGCATGATGTATAAATTTACTCGACAGTATTGATGATGACTATTCAACTACATAC

Protein Sequence

>Glyur000701s00019651.1
MEGGRVVGFVGLDELGLEMASSLLRHGYAVQAFEISDPIINELVKFGGIRCASPLEAGRGVEALVVLISHMDQINDLIFGDEGALKGLKPDTVLILRSTILPSFLQKLEKDLEEIHEIAYVVDAYVSYGRSDDLNGKVTIASSGRSDAIARVRPVLSAMCDKLFTFEGEIGGGSKVKMVSVMLEGIHFIASVEALSLGAKAGIHPWIIYDIISNAAGNSWVFKNNVPLLLKGEVKHQILNTLVKELETILDIAKSLTFPLPLLASTHQQLIHGVSHVCYEDDDGTALIKVNFMNIYAANADAYNAEQLASEXMTAPMSGRRVGFIGLGAMGFGMATHLLSSNFCVVDVDVLXIMVANEAQAENALYGEYGAVSALPPGASVXLSSTVSPAYVSQLERRLHNEGKNLKLVDAPVSGGVKRASMGTLTIMASGTDDALKSVGLVLAALSEKLYVIKGGCGSGSGVKMVNQLLAGVHIASAAEAMAFAARLGLNTRLLFDFITISGGTSWMFENRVPHMLNNDYSPYSALDIFVKDLGIVTXESSSLKVPLHLSTIAHQLYLSGVLYYFKSSYVYETLTGVRVEGNLQALRKDVVLHSLPPEWPQDHVLDIQRLKESNSKILVVLDDDPTGTQTVHDIEVLTEWTXDSLIEQYRKCPKCFFILTNSRSLGSDKASILIKEICRNLDTAAKSVDNIDYTVVLRGDSTLRGHFPEARMTCFSPIILGEMDAWIICPFFLQGGRYTIEDIHFVADSEMLVPAGDTEFAKDASFGYKSSNLRDWVEEKTNGRILASSVVSISIHLLRKGGPDAVCQHLCSLQKAELMGKRFLCRTAASFVSARIGIISKPPVLPKDVGIARERNGGLIIVGSYVPKTTKQVEELKLQCGQFLRSIEVSVEKLAMRPIEEREEEISRTAELADLYLRAHKDTLIMTSRNLITGKTASESLDINFKVSSALVEIVKRITTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWQLGPESRHPGVPYIVFPGNVGDSKALAEVVKSWTYPIRFSSTREILNNAEKGGYAVGAFNVYNLEGVEAVVSAAEEEQSPAILQIHPGALKEGGVPLVACCISAAKQASVPVTVHFDHGTSKQDLVEALELGFSSVMVDGSNLSFNENAAYTKFISSLAHSKDMLVEAELGRLSGTEDDLTVEEYEARLTDVNMAEKFIDETGIDALAVCIGNVHGKYPASGPNLRLDLLKVILHFCFDENLDSLELHALSLKKGVFVVLHGASGLGEELVKECINLGVRKFNVNTEVRKAYMDSLITPKKDLVHVMASAKEAMKAVVAEKMHLFGSAGKA

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00701	46955	69712	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0005975 carbohydrate metabolic process

GO:0055114 oxidation-reduction process

molecular_function

GO:0003824 catalytic activity

GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity

GO:0008270 zinc ion binding

GO:0016491 oxidoreductase activity

GO:0016832 aldehyde-lyase activity

GO:0051287 NAD binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000701s00019651.1	PF03446.10	NAD_binding_2	7	166	4.10E-22
Glyur000701s00019651.1	PF14833.1	NAD_binding_11	171	290	1.90E-18
Glyur000701s00019651.1	PF03446.10	NAD_binding_2	344	451	9.40E-18
Glyur000701s00019651.1	PF14833.1	NAD_binding_11	458	559	4.80E-28
Glyur000701s00019651.1	PF07005.6	DUF1537	820	990	2.60E-19
Glyur000701s00019651.1	PF01116.15	F_bP_aldolase	1040	1331	2.30E-86
Glyur000701s00019651.2	PF03446.10	NAD_binding_2	7	166	3.90E-22
Glyur000701s00019651.2	PF14833.1	NAD_binding_11	171	290	1.90E-18
Glyur000701s00019651.2	PF03446.10	NAD_binding_2	344	451	9.10E-18
Glyur000701s00019651.2	PF14833.1	NAD_binding_11	458	559	4.70E-28
Glyur000701s00019651.2	PF07005.6	DUF1537	789	959	3.10E-19
Glyur000701s00019651.2	PF01116.15	F_bP_aldolase	1009	1300	2.20E-86
Glyur000701s00019651.3	PF03446.10	NAD_binding_2	7	166	3.90E-22
Glyur000701s00019651.3	PF14833.1	NAD_binding_11	171	290	1.90E-18
Glyur000701s00019651.3	PF03446.10	NAD_binding_2	344	451	9.00E-18
Glyur000701s00019651.3	PF14833.1	NAD_binding_11	458	559	4.60E-28
Glyur000701s00019651.3	PF07005.6	DUF1537	780	950	3.00E-19
Glyur000701s00019651.3	PF01116.15	F_bP_aldolase	1000	1291	2.20E-86

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.835
SRR1783600	control	15.043
SRR1783602	moderate drought stress	21.590
SRR1811619	moderate drought stress	21.335

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	19.001
DRR006520	Root Summer glycyrrhizin high producing strain	18.474
DRR006521	Root Winter glycyrrhizin high producing strain	13.025
DRR006522	Root Winter glycyrrhizin high producing strain	12.868
DRR006523	Root Summer glycyrrhizin low producing strain	20.802
DRR006524	Root Summer glycyrrhizin low producing strain	20.580
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.708
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.724

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	75.373
SRR2868004	Drought Stress (root)	109.308
SRR2967015	Control (root)	109.460

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.578
SRR9715740	Leaf	26.835
SRR9715741	Leaf	33.555
SRR9715739	Root	4.356
SRR9715742	Root	22.438
SRR9715743	Root	19.371

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	25.767
SRR8749028	MeJA induced 9h	31.772
SRR8749029	MeJA induced 9h	20.644
SRR8749030	Uninduced	31.776
SRR8749031	Uninduced	35.447
SRR8749032	Uninduced	30.904

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	72.205
SRR8400027	Control - Root	57.019