Gene detail

Gene detail information of Glyur000701s00019646

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G18000.1	0	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NR	XP_003619836.1	0	Phosphoethanolamine N-methyltransferase [Medicago truncatula]
COG	YP_007206765.1	2.00E-54	methyltransferase family protein [Singulisphaera acidiphila DSM 18658]
Swissprot	tr\|Q9FR44\|PEAM1_ARATH	0	Phosphoethanolamine N-methyltransferase 1
trEMBL	tr\|G7KPT7\|G7KPT7_MEDTR	0	Phosphoethanolamine N-methyltransferase {ECO:0000313\|EMBL:AES76054.1}

Sequence

Transcript Sequence

>Glyur000701s00019646.1
CTCTTTTTCTCTTCTCTCATTTTCTTTCTTCACTCTGCCATATGGCTTCGGTGGCGATGAAGCAAGGTGGTGGTGTTGTGAATGTGGTGGAGGATGAACGTGAGGTTCAGAGAGGGTATTGGATGGAACATTGTGAAGGTAATTTGTCGGTGGAGTCAATGATGCTCGATTCCAACGCCTCTCATCTCGACAAGGAAGAGAGACCCGAAGTACTGTCCCTACTACCAGCATATGAAGGAAAATCAGTTTTAGAGCTTGGAGCAGGTATTGGAAGATTCACATGTGAATTGGCCCAGAAAGCTGGGCAGTTGCTTGCTGTGGACTTCATTGAGAGTGCAATAAAGAAGAATGTCAAGTTCATGTGTGCTGACGTCACATGTCCAAAGTTGCATATATCTGAAGGATCAGTCAATTTGATATTCTCAAATTGGTTGCTTATGTACCTCTCAGATAAAGAGGTTGAGAATTTAGCTGAAAGGATGATCAAATGGTTAAAAGTTGATGGATACATATTCTTCAGAGAATCTTGTTTCCACCAATCTGGAGATTCCAAGAGAAAATACAACCCAACTCACTACAGGGAACCCAGATTCTACACCAAGATTTGCTGGACATGGCAAAAAGTTAGATCACAAGATGATAGGGGGTTCCAGAGGTTCTTAGATAGTGTTGAGTATAATCATAAGGATATCTTACTCTATGAGCGAGTTTATGGTCAAGGTTTTGTGAGCACAGGAGGACTTGAAACAACAAGGGAAATTGTGGCAAATTTAGGACTAAAGCCAGGTCAAAAAGTACTGGATGTTGGTTGTGGTATTGGGGGAGGTGACTTTTACATGGCTGAGAATTTTGATGTTGAGGTTGTTGGCATTGACCTCTCCATAAACATGATTTCTCTAGCCATTGAACGTGCTATTGGACTCAAATGTGCNGTTGAGTTTGAATGTGCTGATTGCACTAAGAAAACATACCCTGACAAGACATTTGATGTAATCTACACTCGTGATGCCTTGTTACACATCAAAGACAAACCAGCATTGTTAAGATCATTTTTTAAGTGGTTGAAGCCTGGAGGTACACTTCTAATTACTGATTACTGCAAAAGTGCTGGAAGTCTATCATTAGAATATGCTGAGTACATAAAAAAGAGAGGATATTATATCCATGACATGAAAGCATATTGTCAGATGCTCGAGAATGCTGGATTTGATGATGTCATTGTTGAGGATCAAACTAATTTGTTCATGAGAACTCTACAAAGGGAATTAAATGCCCTTGAGAGCAACAAGGGAGATTTCATNGATGATTTCTCTGAGGCCAAGCAGAAGAGAGGTGCAGCTGGTGAGCAGATATGGGGCTTGTTCATTGCAAAGAAAAAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00701	28636	34736	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K05929	E2.1.1.103, NMT	EC:2.1.1.103	Glycerophospholipid metabolism	map00564

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0008168 methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000701s00019646.1	PF08241.7	Methyltransf_11	70	159	9.10E-09
Glyur000701s00019646.1	PF13489.1	Methyltransf_23	238	392	8.80E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.429
SRR1783600	control	1.465
SRR1783602	moderate drought stress	0.435
SRR1811619	moderate drought stress	0.477

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.661
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.717

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.428
SRR2868004	Drought Stress (root)	2.800
SRR2967015	Control (root)	2.261

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.554
SRR9715740	Leaf	0.374
SRR9715741	Leaf	0.428
SRR9715739	Root	0.000
SRR9715742	Root	5.164
SRR9715743	Root	3.158

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.051
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.147
SRR8749032	Uninduced	0.069

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.263
SRR8400027	Control - Root	41.726