Gene detail

Gene detail information of Glyur000700s00037064.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G16270.2	2.00E-148	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
NR	XP_004488775.1	0	PREDICTED: uncharacterized protein LOC101510527 isoform X2 [Cicer arietinum]
COG	YP_001958461.1	9.00E-27	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q05609\|CTR1_ARATH	2.00E-48	Serine/threonine-protein kinase CTR1
trEMBL	tr\|I1KTY1\|I1KTY1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G17640.1}

Sequence

Transcript Sequence

>Glyur000700s00037064.1
GCACATGGAAGCTTATAATGAATGACGATCTTGAAGAGCTGAGAGAACTGGGTTCTGGTACCTTTGGGACTTTGTATCATGGAAAATGGAGGGGATCAGATGTTGCAATTAAAAGAATAAACTGCTTCGCTGGCCNGTCTTCAGAGCAAGAGAGACTGACCGTAGAGTTCTGGAGGGAAGCTGACATACTTTCCAGGCNTCACCATCCAAATNTGGTGGCATTTTATGGAGTAGTTCAGGATGGACCAGGAGCAACATTAGCCACTGTTACAGAGTTTATGGTGGATGGTTCTCTTAGGCATGTTTTGCTACGTAAAGATAGGTATCTAGATCACCGCAAGAGGCTGATAATTGCCATGGATGCAACTTCTGGAATGGAATATTTACACGCAAAAAATATTGTTCATTTCGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTCGGCAATTTTGGCCTGTCAAAAATAAAGCGCAATACCCTGGTGACTGGTGGTGTGCGTGGAAATCTACCTTGGATGGCACCAGAGCTGCTGAATGGTAGCAGCAATAAGGTTTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTATTGTGGGAGATTCTTACTGGTGAGGAGCCATATGCTAATATGGACTACAGCGCGATCATAGGAGGTATTGTGAACAACACATTAAGACCTACAATCCCCAGTTACTGTGATATCGAGTGGAGAACTCTAATGGAGCAATGTTGGGCACCTAATCCGGCGGTCAGGCCATCTTTTACAGAAATTGCTCACCGCTTGCGGGTGATGTCTGCAGCTGCTGCTAGTCAGACCAAAGGACAGGGACACAAGGCATCTAAATGATCATCAACAGTTTTTGATCTGATGATGCCATATATGTATATGTTTTCATTCAATTCAATTGTGCTATAAAAGAGTTATATATAGATTACAATTATATGAGGGAAAGCAATAGTTGTTTGTATTGAAAATTNTCTGGTCTCTCCACCAGCTCTTTCTGTGCTGATTGTAAATATGTCAGTGTGTGTTAAAACCATATGAATAGGATTGTGCAAGAACATTTGGACTTATAATGCTATTTGACTATTTCCCGTGTGTTTTCAACTGCGGGTTGCCTCCTTTTATTTTCTTCGAATAATATAAGTAACTTGGATATCACCTAGAAAGCAAGGAAAAAAAATAAAAATGATAAAAAATAAAAACAAAACTTATTAGGGGATATTATCTTCTTCTTACCATAAGCACCAAAAGGAAAGCTACAAGTCAAATTATTAAGAAAAACTTAGATGTCAATGATATATTCTTTTTTTTGGTCAATAAGAACATGGTAATAACACAGGTAACACCTGGTCATACGGTATCTATGGCAAGGAAAACAGCATATGCAAAGTCTTAAGAAATACAACAATCTAAACAAAGACACGCTGACGTAACAAACTCCAAGTTGTACAAACGACAAGGAAAACAAGAAAGTAAAACTAAACTACCAAAGCACATAAAACACCGATAGAACAAAAACCTAGCACCAAAAGGATACAGACATCTAAAAACAACGAGAGGGGTTGGGAAAAACCCATTTGGGGCATCCAGAACCTTCTATCTCCACCAATAAACCACAAGTCCCTTTTTGGAACTCCCAAAAGGTGAACCAAGTTTTGCACCAGCATTCCAGAGATAACCAAGGTAGCTTGGCAGGACCACAAACCGGCAGTTCCGGCGGCGGCAGACCAGAAAAGAGACAAAACCAACAAACAGAGCAAAGACTACAGCCAACTACAACCAACGCAGCACCGAGCCCACTACAACAGCACTAAACAACAAACCCAACAGACCGAACCGGCGCACCTGAGCGACCCAACTGTTGGGAGACAAACAACCCAATCCAGACGAGGAAGGCTCACGTCCAACCCACTGCCGATTGCGAAGTCTCCACGCCCCAGCTGAAGGAGGACATCACGACGTCGAAGGCGATCCTCCAAAAAAAACCGCTGACAGAGCCATGGGGTGCCTCACACTGCTGCCAAAGCCAAGTTCAAGCACTCCGTCATCTTCGTCTCTTCTTCCACATCTACCCACTTCGGCAGAACTGGCCCCTCTTCCACCACTGCTATTCGCCGATCCTCTGCAAGAAGAACAAGCGCCGTCACCAGAAACGAAAGCATCGCGGTCCTTAGCAAGGAGAAGCAAGCGCCGCCGTGAAACCGAGCCTAAGAACAAGCCCGACCAAGCCAGAGACGAAAGCAACAAACGACCATAGGAGGGGAAGGGGAGCAAGGCGTGGCTTTGGATTTGAACGAGAAGGACCAAGCGGCGGCTGAAGAAGTTCGTCTACAAAAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00700	123243	127410	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0009966 regulation of signal transduction

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000700s00037064.1	PF07714.12	Pkinase_Tyr	6	266	2.20E-59

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.034
SRR1783600	control	8.994
SRR1783602	moderate drought stress	14.912
SRR1811619	moderate drought stress	15.969

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	18.728
DRR006520	Root Summer glycyrrhizin high producing strain	20.228
DRR006521	Root Winter glycyrrhizin high producing strain	28.037
DRR006522	Root Winter glycyrrhizin high producing strain	27.453
DRR006523	Root Summer glycyrrhizin low producing strain	18.905
DRR006524	Root Summer glycyrrhizin low producing strain	18.504
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.193
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.413

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.854
SRR2868004	Drought Stress (root)	9.090
SRR2967015	Control (root)	8.604

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	16.792
SRR9715740	Leaf	13.830
SRR9715741	Leaf	16.173
SRR9715739	Root	3.672
SRR9715742	Root	13.280
SRR9715743	Root	11.380

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.716
SRR8749028	MeJA induced 9h	12.905
SRR8749029	MeJA induced 9h	9.166
SRR8749030	Uninduced	4.709
SRR8749031	Uninduced	1.166
SRR8749032	Uninduced	3.213

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.566
SRR8400027	Control - Root	24.953