Gene detail information of Glyur000699s00025426 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63270.1 | 3.00E-49 | non-intrinsic ABC protein 10 |
| NR | XP_007011970.1 | 1.43E-61 | Non-intrinsic ABC protein 10 [Theobroma cacao] |
| Swissprot | tr|Q9C8T1|AB1I_ARATH | 1.00E-60 | ABC transporter I family member 1 |
| trEMBL | tr|A0A061GR36|A0A061GR36_THECC | 5.00E-62 | Non-intrinsic ABC protein 10 {ECO:0000313|EMBL:EOY29589.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00699 | 120818 | 121507 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.955 |
| SRR1783600 | control | 2.554 |
| SRR1783602 | moderate drought stress | 2.670 |
| SRR1811619 | moderate drought stress | 2.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.994 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.752 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.133 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.233 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.778 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.285 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.860 |
| SRR2868004 | Drought Stress (root) | 3.612 |
| SRR2967015 | Control (root) | 4.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.568 |
| SRR9715740 | Leaf | 0.457 |
| SRR9715741 | Leaf | 0.453 |
| SRR9715739 | Root | 0.292 |
| SRR9715742 | Root | 0.663 |
| SRR9715743 | Root | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.099 |
| SRR8749028 | MeJA induced 9h | 2.214 |
| SRR8749029 | MeJA induced 9h | 2.261 |
| SRR8749030 | Uninduced | 0.641 |
| SRR8749031 | Uninduced | 0.125 |
| SRR8749032 | Uninduced | 0.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.439 |
| SRR8400027 | Control - Root | 4.142 |