Gene detail information of Glyur000698s00016592 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53590.1 | 5.00E-13 | SAUR-like auxin-responsive protein family |
| NR | XP_006578762.1 | 1.12E-63 | PREDICTED: auxin-induced protein 6B-like [Glycine max] |
| Swissprot | tr|P33083|AX6B_SOYBN | 5.00E-13 | Auxin-induced protein 6B |
| trEMBL | tr|I1JXW7|I1JXW7_SOYBN | 4.00E-64 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G38410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00698 | 121349 | 121675 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000698s00016592.1 | PF02519.9 | Auxin_inducible | 5 | 82 | 2.10E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.980 |
| SRR1783600 | control | 10.643 |
| SRR1783602 | moderate drought stress | 5.892 |
| SRR1811619 | moderate drought stress | 6.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.224 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.838 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.073 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.141 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.160 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.064 |
| SRR2868004 | Drought Stress (root) | 31.719 |
| SRR2967015 | Control (root) | 29.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.390 |
| SRR9715740 | Leaf | 6.991 |
| SRR9715741 | Leaf | 3.421 |
| SRR9715739 | Root | 55.688 |
| SRR9715742 | Root | 22.902 |
| SRR9715743 | Root | 26.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.271 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.193 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.596 |
| SRR8400027 | Control - Root | 16.493 |