Gene detail information of Glyur000698s00016576 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05270.2 | 2.00E-64 | Plant protein of unknown function (DUF869) |
| NR | KHN31199.1 | 0 | Filament-like plant protein [Glycine soja] |
| Swissprot | tr|Q8LLE5|FPP_SOLLC | 2.00E-137 | Filament-like plant protein (Fragment) |
| trEMBL | tr|I1KBQ1|I1KBQ1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G16560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00698 | 44624 | 48329 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000698s00016576.1 | PF05911.6 | DUF869 | 81 | 262 | 9.30E-59 |
| Glyur000698s00016576.1 | PF05911.6 | DUF869 | 308 | 384 | 6.70E-17 |
| Glyur000698s00016576.1 | PF05911.6 | DUF869 | 393 | 588 | 3.10E-29 |
| Glyur000698s00016576.2 | PF05911.6 | DUF869 | 81 | 262 | 9.30E-59 |
| Glyur000698s00016576.2 | PF05911.6 | DUF869 | 308 | 384 | 6.70E-17 |
| Glyur000698s00016576.2 | PF05911.6 | DUF869 | 393 | 588 | 3.10E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.379 |
| SRR1783600 | control | 7.682 |
| SRR1783602 | moderate drought stress | 15.205 |
| SRR1811619 | moderate drought stress | 14.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.190 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.097 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.277 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.121 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.034 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.600 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.910 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.529 |
| SRR2868004 | Drought Stress (root) | 30.153 |
| SRR2967015 | Control (root) | 28.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.925 |
| SRR9715740 | Leaf | 31.199 |
| SRR9715741 | Leaf | 22.998 |
| SRR9715739 | Root | 1.597 |
| SRR9715742 | Root | 13.251 |
| SRR9715743 | Root | 9.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.083 |
| SRR8749028 | MeJA induced 9h | 5.968 |
| SRR8749029 | MeJA induced 9h | 4.514 |
| SRR8749030 | Uninduced | 3.170 |
| SRR8749031 | Uninduced | 0.601 |
| SRR8749032 | Uninduced | 0.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.594 |
| SRR8400027 | Control - Root | 22.715 |