Gene detail information of Glyur000698s00016569 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33490.2 | 1.00E-145 | Eukaryotic aspartyl protease family protein |
| NR | XP_004502990.1 | 0 | PREDICTED: aspartic proteinase Asp1-like [Cicer arietinum] |
| Swissprot | tr|Q0IU52|ASP1_ORYSJ | 3.00E-102 | Aspartic proteinase Asp1 (Precursor) |
| trEMBL | tr|G7JC87|G7JC87_MEDTR | 0 | Eukaryotic aspartyl protease family protein {ECO:0000313|EMBL:AES72936.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00698 | 5859 | 11357 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000698s00016569.1 | PF14543.1 | TAXi_N | 85 | 244 | 2.70E-23 |
| Glyur000698s00016569.1 | PF14541.1 | TAXi_C | 281 | 421 | 1.10E-15 |
| Glyur000698s00016569.2 | PF14543.1 | TAXi_N | 85 | 168 | 1.40E-09 |
| Glyur000698s00016569.2 | PF14541.1 | TAXi_C | 253 | 393 | 9.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.275 |
| SRR1783600 | control | 1.263 |
| SRR1783602 | moderate drought stress | 1.846 |
| SRR1811619 | moderate drought stress | 1.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.089 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.061 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.515 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.259 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.873 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.501 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 68.043 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 66.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.231 |
| SRR2868004 | Drought Stress (root) | 17.909 |
| SRR2967015 | Control (root) | 18.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 387.533 |
| SRR9715740 | Leaf | 188.105 |
| SRR9715741 | Leaf | 421.617 |
| SRR9715739 | Root | 16.936 |
| SRR9715742 | Root | 93.364 |
| SRR9715743 | Root | 82.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 64.383 |
| SRR8749028 | MeJA induced 9h | 139.223 |
| SRR8749029 | MeJA induced 9h | 54.542 |
| SRR8749030 | Uninduced | 43.244 |
| SRR8749031 | Uninduced | 61.024 |
| SRR8749032 | Uninduced | 47.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.196 |
| SRR8400027 | Control - Root | 14.398 |