Gene detail

Gene detail information of Glyur000698s00016568.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G01720.1	4.00E-15	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
NR	BAG50066.1	1.47E-51	transcription factor NAC [Lotus japonicus]
Swissprot	tr\|Q39013\|NAC2_ARATH	5.00E-22	NAC domain-containing protein 2
trEMBL	tr\|B3IX39\|B3IX39_LOTJA	5.00E-52	Uncharacterized protein {ECO:0000313\|EMBL:AFK45786.1}

Sequence

Transcript Sequence

>Glyur000698s00016568.1
ATGGATACAGCCTCCCTCCACCCTGTCCAACGCACGTGTCTTAATTCACTCTGTTTTTGTGGAATTGATTCACCCTATAAAACCCCATCTATTGACTCTCTCCTAAGTGTCAAGTCGCAAAACAGCAGAGGAACGAGAATCATCAACAACAACAACAACAACAGCCACCGAGAGAAATCAGAGCCAGTGAAGAAAGAAAGACAGAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGGGAATGCATATGCAGGGTGAAATAGAGTTGCCACCTGGGTTCAGATTTCACCCCACCGACGATGAATTGGTGAATCACTACCTGTGTAGAAAATGTGCTGGCCAACCAATCGCTGTTCCCCTTGATGATTGGGTGTTGTGCCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAACAACACGGTCACGGTGACACCAATGTTTTCAGGGGCAGGGGAGGTTCACGATTATGAGCATGAGCATGAGCATGAGAGCAAGCCAGAAATCCATAAGTTGGGGGTGAATGACCAATTGTACAACAATGACACGTCGGATTCGGTGTCCAGGCTTCACCACACGGACTCGAGCAGCTCCGGCGGGCACGTCGTTTCGCCGGATGTCACGTGCGACAGGGAGGTGCAGAGTGAGCACACGTGGAATGAGCTAGAGCTACAGCTGGATGACGCCTTTGACTTAGACTTTGATTTTCAGTTCAATTACTTGGATGATGACCCTTTTGGGGCTCAGGTCCAGTACCACCAAATGAACCAGCTCTCGCCNTTGCAGGACATGTTCATGTACCAACAGAAGCCCTTTTGATTTGATCATTCTTTCAAGCAAGCATTTGTGAAAAGGAAAGTTTTTGGGAAGGAGGGANTTCGGTTGCCTAATTAGATGGATGGGAGTACCAGAAAGGACCAGCATATATTTTTTTTTTATTTTTTGTAGGAAAAGTCAGCATTTATTATCATGCATTTACACCTAACTGGTAACTACTGCATGTGGACCATGGNGGTGCCGGCTGGTTTGGTTTGGCTTGGCTTGGCTAGGCCTCGCGTGCCAATTAACCAAACAGTGTGGTGCACGTGTGGTGACATGGACCCTTTGGAATTTTGTGGAAAAAAANAAAACAAAAGAATTGTAAANGGAGATTGGCCCTGCAGTGTGTAAGTAAAAAAATAAGCAGTGGGATGATCTCAACTGGGTGTAGATCCAATGGGCCATGTTAGAATGTTAGTGTGTTAATGTGTAGGTGCAAGGAAAATTCTTGTTTCATTGCAGTTGTGATAGGATTCTTTTTTTCCTTATATTTGTAATATATAACTACCTTATTCAATTCAAATGAACAATTGAATGAAAAGTCTTCAATTCAAAGGGATGGAAATGGTGCAGCCTGGCCCGGCCTCGGGCGTCCATGTTTGACACTTGACATTATACTCATATGTTTGTCTTTATTTGTGAAGCAAATAGCATTATGGGCAGAACAGAAACAACGTTCAAGGAAAAAAAAAACTTGTAACAAAATACTACTCAGAGTGTGCTAAAGATAAGTTAATGCTGCTCATAGAATTGTCATGCAAATATAAATGGTCTATAATTGATGTTCCCAACTTGAGGGTCCCATAATACAGAACAACTTANTAGGTGAAATATATAGCAAGGGAGATAAACTTGTTTTCTAGAGTAAAATTTGAACAGAGCGGAAAAACTTGTTTCCTACATATAATCTTTGCTCTACCTTTATCCTCAGAGTTGTGCAATCAAACTAAAAACATGATATGATTTATATAACTGATTACTTTGTCAGTTGTAACCATAACCAGTCGGAATTACACTATAAACACTAAAAATCAGGGTAGACCTCTGTACCACGTAACCGATATATTATACACAAGGATATCTTCACAAACAGATTAAGGTTCATTTGATACAACCATCCTTTTACTATAAAGTAGGACAATAGCTACCATCTGATGATAACAGGTATAAATTGAGTGGACCAGGTATCTTTTGTGATCAAATGCTGGCATCTCTGGATTTTGGAACCCGGTTACAATCTGCCGGTGCCCAACCAATCAACTGCTTCTCATTGTCAAATACCATCACTTTGTCTAGCATGG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00698	5766	8587	+

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000698s00016568.1	PF02365.10	NAM	89	118	1.50E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.738
SRR1783600	control	0.723
SRR1783602	moderate drought stress	1.294
SRR1811619	moderate drought stress	1.404

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	25.275
DRR006520	Root Summer glycyrrhizin high producing strain	24.932
DRR006521	Root Winter glycyrrhizin high producing strain	1.832
DRR006522	Root Winter glycyrrhizin high producing strain	1.766
DRR006523	Root Summer glycyrrhizin low producing strain	60.195
DRR006524	Root Summer glycyrrhizin low producing strain	63.175
DRR006525	Leaf Summer glycyrrhizin high producing strain	84.104
DRR006526	Leaf Summer glycyrrhizin high producing strain	83.579

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.722
SRR2868004	Drought Stress (root)	12.024
SRR2967015	Control (root)	7.651

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	215.949
SRR9715740	Leaf	101.150
SRR9715741	Leaf	231.473
SRR9715739	Root	15.122
SRR9715742	Root	80.218
SRR9715743	Root	37.039

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	38.421
SRR8749028	MeJA induced 9h	95.700
SRR8749029	MeJA induced 9h	47.892
SRR8749030	Uninduced	41.712
SRR8749031	Uninduced	70.461
SRR8749032	Uninduced	83.165

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.669
SRR8400027	Control - Root	9.171