Gene detail information of Glyur000696s00018516 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48470.1 | 4.00E-124 | |
| NR | XP_004498491.1 | 0 | PREDICTED: uncharacterized protein LOC101511767 [Cicer arietinum] |
| trEMBL | tr|G7I294|G7I294_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AES58712.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00696 | 70472 | 74830 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.090 |
| SRR1783600 | control | 9.410 |
| SRR1783602 | moderate drought stress | 13.391 |
| SRR1811619 | moderate drought stress | 13.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.376 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.978 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.805 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.495 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.864 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.814 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.003 |
| SRR2868004 | Drought Stress (root) | 1.543 |
| SRR2967015 | Control (root) | 2.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.737 |
| SRR9715740 | Leaf | 81.234 |
| SRR9715741 | Leaf | 28.752 |
| SRR9715739 | Root | 1.767 |
| SRR9715742 | Root | 5.618 |
| SRR9715743 | Root | 4.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.260 |
| SRR8749028 | MeJA induced 9h | 7.688 |
| SRR8749029 | MeJA induced 9h | 7.190 |
| SRR8749030 | Uninduced | 1.879 |
| SRR8749031 | Uninduced | 0.985 |
| SRR8749032 | Uninduced | 1.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.975 |
| SRR8400027 | Control - Root | 9.603 |