Gene detail

Gene detail information of Glyur000696s00018512

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G58350.2	Putative serine esterase family protein
NR	XP_004498450.1	PREDICTED: protein FAM135B-like isoform X1 [Cicer arietinum]
trEMBL	tr\|A0A072VDP9\|A0A072VDP9_MEDTR	Serine esterase family protein, putative {ECO:0000313\|EMBL:KEH39721.1}

Sequence

Transcript Sequence

>Glyur000696s00018512.1
ATGTTGATCGTGGAGGGTGCTGAGAGAGTGAATGATAGAAGTTACAATCCAGTGTTTCATTTCCACACAGATGGACTGTCTGTTGGTTTGGAATATATAAGTTGGCCAGTAGAGAGGCTACCTGATGTAATGCCACACTCTTCTAAGGTCAGGCCGGTGGCTATGTTTGAAGCTGTGCAGGAGATTGCCATCTACATTCATAGATGGTATCAGATTAAAATTACCATGAAATGGGAGGATAATGAAAATATATCTTTTGGAATTCCAGCTAGAGTTGTTCAATATGAAGCTCCTGATCTGGGTCCTAGCAGTATATATGGTATTTGGAGGATTGATGANACAGACAACAGTTTCTCAACACAACCCTTTCGGATAAAATATGCTAGGCAGGACATTCATTTATGTATGATGATCTCATTCAACTTATCTCTTAGCAGATTTAAGGGTTTACCTACAACTGCTGTAATTTTAAAGTTCGAGCTTATGTATGCTCCCATATTTGAAAATGGTGCTGACTTGCAAGCTTCTCTGGATGCTTACCCTGCTGCTGTCCATGAATTCCGAATTCCTCCTAAAGCTCTTTTAGGGCTGCATTCATATTGTCCTGTACATTTTGATGCTTTACATGCAGTTCTTATTGATGTCAGTGTACATGTCAGTCTACTAAAAGCTGCCTCTTACCCATCTACATCGAAGGTACCCAGCAATTCTNGCAATGTTGAAGTCATTGCTGATAAAAGTTATGACACAATGAACCAAGGCTCAGGTGAAGTTGCCTCTGTAGATTTGATAAATGTCATGCTTGTTAGGGCATTATTAACAGCTCGTGATATATTGCTTAAAGAACTACAAAAACTTAGCAAAGCAGTTGATCAAGCTATTGAGATTTCAGAGTTTGTGTCAAAAATGAACAATGTCAAATTATTAAATTTTGTATCGCAAGCAAACCAGTTTGCTACAGATGTTGAAATCTCAGCACAAGGCAAGCCACNGAATGGTCTTAAGGGAATAAATGGTGCTCTAGATTTTCTGATTGCTGAGAAGCTCCATTCCTTGTCGAAGAGTGAGCTGTTGGACTGTTGTCATTTAGTAGGAGACCAATTGTTGTATTTATGGAACATATTTCTAAAGTTCCACAGGGATAACAAATCAAAGATTCTAGATTTTTTGCGTGATATATGGGCTAAGGATAGGAAAGCTGAATGGTCAATATGGATGGTGTACTCTAAGGTAGAGATGCCTCATCATTATATAAATAGTGGGAGTGATGAGTCTTCCAGTCGTGGGGTACACAGAAGAGTTTCCAGTTTATGGAAGTTACCTGATGATCCTCTTCAGACTGCAGCTACACGTGCTGAACTTCATCGAAGGAGCATTGCACAAATGAGGATTAACAACCAGTCAATTCAAGACATGCAAATGTTTGAAGATCCTTCACGTATACCAATTGTGATTGTTGAACGTGTGATGAATGCACCACGACGTACAATCAGTGAAAATTCATACCTGAGACATATCAGACTTGCAAATTCACGTAATTTTCGAAGTGGGCTCAACTCAGACGCTGCAAACAAGGAATCTGTACCACAAAGTAATGCTCGTGTATTGAAGATTGTTGTCTTTGTGCATGGGTTTCAGGCAAGGTTGGGGCATCATCTGGATCTACGACTTATTCGAAATCAATGGCTTTTGATAGATCCCAAGGTAGAATTTCTTATGTCAGAGGCTAATGAAGATAAAACATCAGGAGACTTCAGAGAAATGGGACAAAGGCTAGCTCAGGAAGTTGTTTCCTTTGTTAAAAAGAAAATGGATAAAGCATCAAGATCCGGGAATTTGGGAGATATTAGACTAAGTTTTGTTGGACATTCTATTGGTAACCTCATTATAAGAACAGCAATAGCAGAGAGCATGATGGAGCCATTTCTAAGATACCTACATACATATGTTTCAGTATCTGGTCCACACTTGGGGTATCTTTACAGTTCAAACTCTCTGTTTAATTCTGGGTTGTGGCTTTTGAAGAAACTAAAAGGCACGCAGTGCATTCATCAGCTCACCTTCACAGATGATCCAGATATTCAAAATACATTTCTATATAAACTTTGCAAGCAGAAGACCTTGGATCATTTTAGGCATATAATTTTGCTATCCTCCCCNCAGGATGGTTATGTGCCTTACCATTCTGCTAGGATTGAATCATGCCATGCTGCTTCACATGACAATTCAAAGAAGGGGAGAGTGTTCCTAGAGATGTTGAATCATTGTTTGGACCAAATCCGTGCCAATCCCTATGAACGTCGAGTTTTTATGCGTTGTGATGTCAATTTTGATCCCACTGCCTATGGCAAGAATTTAAACTCTTTCATTGGGAGGGCTGCTCATATCGAGTTTCTNGAGTCTGACATCTTTGCGAGGTTCATAATGTGGTCATTTCCAGAACTATTTCGATAGGATTTACTGTGATTTGCCTTCTCTGCATTCAGGTTCTCTAAGGCATTCAGACATAAAGCTCTCCCCCATTTATTAGCTTCAGAGACCTGCAGTGCTTAGATTTCTTCAGTCAGATGCAATTCATAGAATGGAATCACCTTGGTATGCATAAGATGGCAGGAGCATTTAGACATCTGAGCTGCATATTTAATTGGCTTCAAGATGTTTCTTTGCAACATATNTATACATAGCTTTAGGAATGGTTCCAAGAAATATAGAGATGTAATTATTTTAGGTTAGATAGATCAATGTTTTAATGTNACGCAGTTAGAGTTATATCAGAAGTCGTTAACACACTGAGGGTCGGGAAGGGATTCGGCAGGCATTGGAATGTAGTAACGAAATTAAGGCATGAATTTTCNACTAAAGAAAAAGCCGTATTCATTTAGATTTAGATGAAATAACTGAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00696	52284	63342	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000696s00018512.1	PF12394.3	DUF3657	157	222	3.70E-13
Glyur000696s00018512.1	PF05057.9	DUF676	536	736	3.10E-57
Glyur000696s00018512.2	PF12394.3	DUF3657	157	222	3.60E-13
Glyur000696s00018512.2	PF05057.9	DUF676	536	707	9.00E-53

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.557
SRR1783600	control	7.681
SRR1783602	moderate drought stress	9.117
SRR1811619	moderate drought stress	9.106

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.479
DRR006520	Root Summer glycyrrhizin high producing strain	9.513
DRR006521	Root Winter glycyrrhizin high producing strain	8.241
DRR006522	Root Winter glycyrrhizin high producing strain	8.338
DRR006523	Root Summer glycyrrhizin low producing strain	9.725
DRR006524	Root Summer glycyrrhizin low producing strain	9.701
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.219
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.156

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.186
SRR2868004	Drought Stress (root)	33.486
SRR2967015	Control (root)	25.537

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.250
SRR9715740	Leaf	11.804
SRR9715741	Leaf	14.040
SRR9715739	Root	0.996
SRR9715742	Root	3.910
SRR9715743	Root	3.110

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.594
SRR8749028	MeJA induced 9h	27.888
SRR8749029	MeJA induced 9h	14.749
SRR8749030	Uninduced	13.334
SRR8749031	Uninduced	9.513
SRR8749032	Uninduced	14.372

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.781
SRR8400027	Control - Root	11.589